myRT

myRT report for GCA_014384865.1_ASM1438486v1

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Seq: JACNFJ010001341.1 (3176 bp)
Overview 1 RT 1: 1-3174 bp Neighborhood of RT #1 [1, 3174] RVT-GII GIIM Feature: gene Location: 1-369 bp Feature: gene Location: 1071-2489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1434-2049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 434-2049 bp Feature: domain Description: GIIM Note: maturase Location: 2094-2301 bp Feature: domain Description: GIIM Note: maturase Location: 2094-2301 bp Feature: gene Location: 2707-3174 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACNFJ010000321.1 (4507 bp)
Overview 1 RT 1: 162-2643 bp Neighborhood of RT #1 [162, 4505] COG4951 RVT-UG25 Feature: gene Location: 162-461 bp Feature: gene Location: 516-4505 bp Feature: domain Description: COG4951 Location: 870-1284 bp Feature: domain Description: COG4951 Location: 870-12 84 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 2013-2643 bp Feature: RT Description: RVT-UG2 5 Note: UG2 5 RT Location: 2 013-2 643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4951 (Uncharacterized protein ), RVT-UG25

Seq: JACNFJ010000409.1 (4526 bp)
Overview 1 RT 1: 2114-3835 bp Neighborhood of RT #1 [2114, 4041] HRDC Avd_like RVT-DGRs Feature: gene Location: 2114-2650 bp Feature: domain Description: HRDC Location: 2372-2567 bp Feature: domain Description: HRDC Location: 23 72-2567 bp Feature: gene Location: 2655-3008 bp Feature: domain Description: Avd_like Location: 2679-2982 bp Feature: domain Description: Avd_like Location: 2679-2982 bp Feature: gene Location: 3025-4041 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3235-3835 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 23 5-3 83 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HRDC (smart00341), Avd_like (cd16376), RVT-DGRs

Seq: JACNFJ010000672.1 (3002 bp)
Overview 1 RT 1: 2-2734 bp Neighborhood of RT #1 [2, 2802] AcrB RVT-GII DUF1353 Feature: gene Location: 2-349 bp Feature: domain Description: AcrB Location: 11-344 bp Feature: domain Description: AcrB Location: 11-34 4 bp Feature: gene Location: 459-1853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 825-1476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 825-14 76 bp Feature: gene Location: 2029-2289 bp Feature: gene Location: 2371-2802 bp Feature: domain Description: DUF1353 Location: 2578-2734 bp Feature: domain Description: DUF1353 Location: 2578-2734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrB (COG0841), RVT-GII, DUF1353 (pfam07087)

Seq: JACNFJ010000952.1 (3349 bp)
Overview 1 RT 1: 822-3318 bp Neighborhood of RT #1 [822, 3347] COG2929 RVT-GII NikR Feature: gene Location: 822-1115 bp Feature: domain Description: COG2929 Location: 825-1095 bp Feature: domain Description: COG2929 Location: 825 -1095 bp Feature: gene Location: 1198-1602 bp Feature: gene Location: 1599-2912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1860-2553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1860-25 5 3 bp Feature: gene Location: 3027-3347 bp Feature: domain Description: NikR Location: 3192-3318 bp Feature: domain Description: NikR Location: 3192-3318 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2929 (Uncharacterized conserved protein, DUF497 family ), RVT-GII, NikR (COG0864)

Seq: JACNFJ010000045.1 (3880 bp)
Overview 1 RT 1: 1960-3756 bp Neighborhood of RT #1 [1960, 3878] ParE_toxin RVT-GII RVT-GII Feature: gene Location: 1960-2292 bp Feature: domain Description: ParE_toxin Location: 1972-2245 bp Feature: domain Description: ParE_toxin Location: 1972-2245 bp Feature: gene Location: 2464-2658 bp Feature: gene Location: 2807-3610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3104-3551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3104-3551 bp Feature: gene Location: 3591-3878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3594-3756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3594-3756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE_toxin (pfam05016), RVT-GII

Seq: JACNFJ010000606.1 (8132 bp)
Overview 1 RT 1: 22-3145 bp Neighborhood of RT #1 [22, 3177] RVT-GII YaeQ Adenine_glyco Feature: gene Location: 22-1791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 718-1408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 18-1408 bp Feature: gene Location: 1896-2444 bp Feature: domain Description: YaeQ Location: 1899-2415 bp Feature: domain Description: YaeQ Location: 1899-2415 bp Feature: gene Location: 2596-3177 bp Feature: domain Description: Adenine_glyco Location: 2620-3145 bp Feature: domain Description: Adenine_glyco Location: 2620-3145 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, YaeQ (pfam07152), Adenine_glyco (pfam03352)

Seq: JACNFJ010001638.1 (2731 bp)
Overview 1 RT 1: 519-2728 bp Neighborhood of RT #1 [519, 2728] RVT-GII GIIM Feature: gene Location: 519-1847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 804-1419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8 04-1419 bp Feature: domain Description: GIIM Note: maturase Location: 1467-1695 bp Feature: domain Description: GIIM Note: maturase Location: 1467-1695 bp Feature: gene Location: 2135-2728 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACNFJ010001373.1 (3129 bp)
Overview 1 RT 1: 280-3126 bp Neighborhood of RT #1 [280, 3126] RVT_N RVT-GII GIIM Feature: gene Location: 280-510 bp Feature: gene Location: 1201-2688 bp Feature: domain Description: RVT_N Location: 1270-1513 bp Feature: domain Description: RVT_N Location: 1270-1513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1558-2179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1558-2179 bp Feature: domain Description: GIIM Note: maturase Location: 2242-2467 bp Feature: domain Description: GIIM Note: maturase Location: 2242-2467 bp Feature: gene Location: 2747-2878 bp Feature: gene Location: 2932-3126 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JACNFJ010001415.1 (3043 bp)
Overview 1 RT 1: 61-3040 bp Neighborhood of RT #1 [61, 3040] HisM RVT-GII Feature: gene Location: 61-693 bp Feature: domain Description: HisM Location: 70-676 bp Feature: domain Description: HisM Location: 70-676 bp Feature: gene Location: 1319-2641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1607-2288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1607-2288 bp Feature: gene Location: 2783-3040 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HisM (COG0765), RVT-GII