myRT

myRT report for GCA_014385475.1_ASM1438547v1

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Seq: JACSOD010000001.1 (3422474 bp)
Overview 1 RT 1: 360-3337 bp 2 RT 2: 7418-24012 bp 3 RT 3: 34751-46598 bp 4 RT 4: 49307-53589 bp 5 RT 5: 997396-1001736 bp 6 RT 6: 3152497-3160058 bp 7 RT 7: 3163802-3167256 bp Neighborhood of RT #1 [360, 3337] DNA_methylase RVT-GII GIIM group_II_RT_mat Neighborhood of RT #2 [7418, 24473] GIIM RVT-GII group_II_RT_mat RVT-GII group_II_RT_mat RVT-GII GIIM RVT-GII GIIM HsdM RMtype1_S_Fco49512ORF2615P-TRD2-CR2_like RVT-GII GIIM RVT-GII GIIM DnaJ Neighborhood of RT #3 [34751, 46598] Rhs_assc_core RVT-GII GIIM RVT-GII M1_APN_like RVT-GII GIIM RVT-GII RVT-GII GIIM group_II_RT_mat Neighborhood of RT #4 [49307, 53589] Por_Secre_tail RVT-GII GIIM RimL Neighborhood of RT #5 [997396, 1001736] KOG3827 RVT-GII GIIM Neighborhood of RT #6 [3152497, 3160435] RVT-GII GIIM EpsG RVT-GII GIIM PAPS_reductase DUF772 Neighborhood of RT #7 [3163802, 3167324] RVT-GII RVT-GII GIIM RE_NgoPII DNA_methylase Feature: gene Location: 360-587 bp Feature: domain Description: DNA_methylase Location: 372-528 bp Feature: domain Description: DNA_methylase Location: 372-528 bp Feature: gene Location: 684-1622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 711-1056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 1 -1 056 bp Feature: domain Description: GIIM Note: maturase Location: 1128-1347 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 28-1 347 bp Feature: gene Location: 1792-2058 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1822-1999 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 822-1 999 bp Feature: gene Location: 2801-3337 bp Feature: gene Location: 7418-7723 bp Feature: gene Location: 7778-8131 bp Feature: domain Description: GIIM Note: maturase Location: 7787-7910 bp Feature: domain Description: GIIM Note: maturase Location: 7787-791 0 bp Feature: gene Location: 8290-8655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8296-8617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8296-861 7 bp Feature: gene Location: 8829-9095 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 8859-9036 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 8859-9036 bp Feature: gene Location: 9674-9928 bp Feature: gene Location: 10256-10546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10262-10541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0262-1 0541 bp Feature: gene Location: 10720-10986 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 10750-10936 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 0750-1 0936 bp Feature: gene Location: 11690-12658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11693-12278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 693-1 2278 bp Feature: domain Description: GIIM Note: maturase Location: 12350-12563 bp Feature: domain Description: GIIM Note: maturase Location: 1 2350-1 2563 bp Feature: gene Location: 12752-12880 bp Feature: gene Location: 13584-14774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13779-14394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3779-1 4394 bp Feature: domain Description: GIIM Note: maturase Location: 14466-14679 bp Feature: domain Description: GIIM Note: maturase Location: 1 4466-1 4679 bp Feature: gene Location: 15570-15992 bp Feature: gene Location: 16294-16470 bp Feature: gene Location: 16541-17188 bp Feature: domain Description: HsdM Location: 16550-17168 bp Feature: domain Description: HsdM Location: 1 6550-1 71 68 bp Feature: gene Location: 17545-18075 bp Feature: domain Description: RMtype1_S_Fco49512ORF2615P-TRD2-CR2_like Location: 17614-18007 bp Feature: domain Description: RMtype1 _S_Fco4951 2ORF261 5P-TRD2-CR2_like Location: 1 761 4-1 8007 bp Feature: gene Location: 18316-19512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18511-19126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 851 1 -1 91 26 bp Feature: domain Description: GIIM Note: maturase Location: 19198-19372 bp Feature: domain Description: GIIM Note: maturase Location: 1 91 98-1 9372 bp Feature: gene Location: 20023-20190 bp Feature: gene Location: 20293-20640 bp Feature: gene Location: 20718-21107 bp Feature: gene Location: 21163-22479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21358-21973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 358-21 973 bp Feature: domain Description: GIIM Note: maturase Location: 22045-22258 bp Feature: domain Description: GIIM Note: maturase Location: 22045-22258 bp Feature: gene Location: 23187-23747 bp Feature: gene Location: 23748-24473 bp Feature: domain Description: DnaJ Location: 23754-24012 bp Feature: domain Description: DnaJ Location: 23754-2401 2 bp Feature: gene Location: 34751-36151 bp Feature: domain Description: Rhs_assc_core Location: 35057-35159 bp Feature: domain Description: Rhs_assc_core Location: 35057-351 59 bp Feature: gene Location: 36198-36929 bp Feature: gene Location: 37166-38110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37193-37538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371 93-37538 bp Feature: domain Description: GIIM Note: maturase Location: 37610-37793 bp Feature: domain Description: GIIM Note: maturase Location: 3761 0-37793 bp Feature: gene Location: 38077-38547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38272-38539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38272-38539 bp Feature: gene Location: 39123-39656 bp Feature: gene Location: 39766-40530 bp Feature: domain Description: M1_APN_like Location: 39802-40120 bp Feature: domain Description: M1 _APN_like Location: 39802-401 20 bp Feature: gene Location: 41119-41868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41125-41488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 1 25-41 488 bp Feature: domain Description: GIIM Note: maturase Location: 41560-41773 bp Feature: domain Description: GIIM Note: maturase Location: 41 560-41 773 bp Feature: gene Location: 41984-42310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42179-42308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 421 79-42308 bp Feature: gene Location: 43014-43763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43020-43383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43020-43383 bp Feature: domain Description: GIIM Note: maturase Location: 43455-43668 bp Feature: domain Description: GIIM Note: maturase Location: 43455-43668 bp Feature: gene Location: 43937-44200 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 43967-44156 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 43967-441 56 bp Feature: gene Location: 44976-46598 bp Feature: gene Location: 49307-49924 bp Feature: domain Description: Por_Secre_tail Location: 49718-49922 bp Feature: domain Description: Por_Secre_tail Location: 4971 8-49922 bp Feature: gene Location: 49971-50252 bp Feature: gene Location: 50365-51681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50560-51175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50560-51 1 75 bp Feature: domain Description: GIIM Note: maturase Location: 51247-51460 bp Feature: domain Description: GIIM Note: maturase Location: 51 247-51 460 bp Feature: gene Location: 52594-52947 bp Feature: domain Description: RimL Location: 52615-52936 bp Feature: domain Description: RimL Location: 5261 5-52936 bp Feature: gene Location: 53020-53589 bp Feature: gene Location: 997396-998325 bp Feature: domain Description: KOG3827 Location: 997441-998290 bp Feature: domain Description: KOG3827 Location: 997441 -998290 bp Feature: gene Location: 998736-998873 bp Feature: gene Location: 999113-1000567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 999308-999923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 999308-999923 bp Feature: domain Description: GIIM Note: maturase Location: 999995-1000214 bp Feature: domain Description: GIIM Note: maturase Location: 999995-1 00021 4 bp Feature: gene Location: 1000631-1001407 bp Feature: gene Location: 1001539-1001736 bp Feature: gene Location: 3152497-3152895 bp Feature: gene Location: 3153353-3153490 bp Feature: gene Location: 3153807-3155048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3153927-3154542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 53927-31 54542 bp Feature: domain Description: GIIM Note: maturase Location: 3154614-3154827 bp Feature: domain Description: GIIM Note: maturase Location: 31 5461 4-31 54827 bp Feature: gene Location: 3155109-3155282 bp Feature: gene Location: 3155396-3156520 bp Feature: domain Description: EpsG Location: 3155711-3156473 bp Feature: domain Description: EpsG Location: 31 5571 1 -31 56473 bp Feature: gene Location: 3156840-3156977 bp Feature: gene Location: 3157218-3158534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3157413-3158028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 5741 3-31 58028 bp Feature: domain Description: GIIM Note: maturase Location: 3158100-3158313 bp Feature: domain Description: GIIM Note: maturase Location: 31 581 00-31 5831 3 bp Feature: gene Location: 3158605-3159489 bp Feature: domain Description: PAPS_reductase Location: 3158644-3159091 bp Feature: domain Description: PAPS_reductase Location: 31 58644-31 59091 bp Feature: gene Location: 3159893-3160435 bp Feature: domain Description: DUF772 Location: 3159896-3160058 bp Feature: domain Description: DUF772 Location: 31 59896-31 60058 bp Feature: gene Location: 3163802-3163999 bp Feature: gene Location: 3164342-3164479 bp Feature: gene Location: 3164720-3165106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3164915-3165023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 6491 5-31 65023 bp Feature: gene Location: 3165160-3166032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3165166-3165529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 651 66-31 65529 bp Feature: domain Description: GIIM Note: maturase Location: 3165601-3165814 bp Feature: domain Description: GIIM Note: maturase Location: 31 65601 -31 6581 4 bp Feature: gene Location: 3166090-3166935 bp Feature: domain Description: RE_NgoPII Location: 3166096-3166873 bp Feature: domain Description: RE_NgoPII Location: 31 66096-31 66873 bp Feature: gene Location: 3166932-3167324 bp Feature: domain Description: DNA_methylase Location: 3166944-3167256 bp Feature: domain Description: DNA_methylase Location: 31 66944-31 67256 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA_methylase (pfam00145), RVT-GII, GIIM (pfam08388), group_II_RT_mat (TIGR04416), HsdM (COG0286), RMtype1_S_Fco49512ORF2615P-TRD2-CR2_like (cd17255), DnaJ (smart00271), Rhs_assc_core (TIGR03696), M1_APN_like (cd09604), Por_Secre_tail (TIGR04183)
RimL (COG1670), KOG3827 (KOG3827, Inward rectifier K+ channel ), EpsG (TIGR03029), PAPS_reductase (TIGR02057), DUF772 (pfam05598), RE_NgoPII (pfam09521)