myRT

myRT report for GCA_014397645.1_ASM1439764v1

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Seq: VZQN01000062.1 (27062 bp)
Overview 1 RT 1: 115-7722 bp Neighborhood of RT #1 [115, 7754] RVT-UG12 PHA02517 InsE Feature: gene Location: 115-423 bp Feature: gene Location: 661-4449 bp Feature: gene Location: 4640-6394 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 5012-5456 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 501 2-5456 bp Feature: gene Location: 6619-7449 bp Feature: domain Description: PHA02517 Location: 6715-7435 bp Feature: domain Description: PHA0251 7 Location: 671 5-7435 bp Feature: gene Location: 7446-7754 bp Feature: domain Description: InsE Location: 7449-7722 bp Feature: domain Description: InsE Location: 7449-7722 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12, PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: VZQN01000017.1 (152711 bp)
Overview 1 RT 1: 150550-152679 bp Neighborhood of RT #1 [150550, 152708] RVT-GII IS5 Feature: gene Location: 150550-150726 bp Feature: gene Location: 150804-151082 bp Feature: gene Location: 151079-151957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 151433-151715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 151433-151715 bp Feature: gene Location: 152229-152708 bp Feature: domain Description: IS5 Location: 152232-152679 bp Feature: domain Description: IS5 Location: 152 2 32 -152 679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, IS5 (COG3039)

Seq: VZQN01000047.1 (55586 bp)
Overview 1 RT 1: 52156-55306 bp Neighborhood of RT #1 [52156, 55404] nifA RVT-GII GIIM Feature: gene Location: 52156-53994 bp Feature: domain Description: nifA Location: 52315-53992 bp Feature: domain Description: nifA Location: 523 15-53 992 bp Feature: gene Location: 54270-54434 bp Feature: gene Location: 54743-55069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54812-54959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54812-54959 bp Feature: gene Location: 55066-55404 bp Feature: domain Description: GIIM Note: maturase Location: 55087-55306 bp Feature: domain Description: GIIM Note: maturase Location: 55087-553 06 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nifA (TIGR01817), RVT-GII, GIIM (pfam08388)

Seq: VZQN01000110.1 (4983 bp)
Overview 1 RT 1: 2702-4861 bp Neighborhood of RT #1 [2702, 4861] Pat_hypo_Ecoli_Z1214_like RVT-GII Feature: gene Location: 2702-2872 bp Feature: gene Location: 2909-4048 bp Feature: domain Description: Pat_hypo_Ecoli_Z1214_like Location: 2960-3728 bp Feature: domain Description: Pat_hypo_Ecoli_Z1214 _like Location: 2960-3728 bp Feature: gene Location: 4108-4689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4141-4411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 14 1-4 4 11 bp Feature: gene Location: 4640-4861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Pat_hypo_Ecoli_Z1214_like (cd07209), RVT-GII

Seq: VZQN01000147.1 (1622 bp)
Overview 1 RT 1: 170-1364 bp Neighborhood of RT #1 [170, 1438] RVT-GII GIIM Feature: gene Location: 170-1438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 419-1082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 419-1082 bp Feature: domain Description: GIIM Note: maturase Location: 1151-1364 bp Feature: domain Description: GIIM Note: maturase Location: 115 1-1364 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VZQN01000021.1 (136771 bp)
Overview 1 RT 1: 125631-134087 bp Neighborhood of RT #1 [125631, 134089] PRK05643 gyrB RVT-UG11 TS_Pyrimidine_HMase aGPT-Pplase3 Feature: gene Location: 125631-126734 bp Feature: domain Description: PRK05643 Location: 125643-126732 bp Feature: domain Description: PRK056 43 Location: 1256 43-126 732 bp Feature: gene Location: 126849-129320 bp Feature: domain Description: gyrB Location: 126879-129318 bp Feature: domain Description: gyrB Location: 126 879-129318 bp Feature: gene Location: 130417-131190 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 130543-130996 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 130543-130996 bp Feature: gene Location: 132063-133124 bp Feature: domain Description: TS_Pyrimidine_HMase Location: 132087-132738 bp Feature: domain Description: TS_Pyrimidine_HMase Location: 132087-132738 bp Feature: gene Location: 133157-134089 bp Feature: domain Description: aGPT-Pplase3 Location: 133253-134087 bp Feature: domain Description: aGPT-Pplase3 Location: 133253-134087 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05643 (DNA polymerase III subunit beta; Validated), gyrB (TIGR01059), RVT-UG11, TS_Pyrimidine_HMase (cl19097), aGPT-Pplase3 (pfam18746)