myRT

myRT report for GCA_014397665.1_ASM1439766v1

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Seq: VZQO01000123.1 (1704 bp)
Overview 1 RT 1: 229-1453 bp Neighborhood of RT #1 [229, 1701] RVT-GII GIIM Feature: gene Location: 229-1701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442-1180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442-1 1 80 bp Feature: domain Description: GIIM Note: maturase Location: 1294-1453 bp Feature: domain Description: GIIM Note: maturase Location: 1 294-1 453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VZQO01000041.1 (71510 bp)
Overview 1 RT 1: 39404-45666 bp Neighborhood of RT #1 [39404, 45677] PRK11556 IclR RVT-GII GIIM pbpG Feature: gene Location: 39404-40861 bp Feature: domain Description: PRK11556 Location: 39593-40760 bp Feature: domain Description: PRK11556 Location: 39593-40760 bp Feature: gene Location: 41217-42062 bp Feature: domain Description: IclR Location: 41304-42030 bp Feature: domain Description: IclR Location: 41304-42 030 bp Feature: gene Location: 43481-44332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43490-43793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43490-43793 bp Feature: domain Description: GIIM Note: maturase Location: 43871-44102 bp Feature: domain Description: GIIM Note: maturase Location: 43871-44102 bp Feature: gene Location: 44537-44833 bp Feature: gene Location: 44844-45677 bp Feature: domain Description: pbpG Location: 44865-45666 bp Feature: domain Description: pbpG Location: 44865-45666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11556 (MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit), IclR (pfam01614), RVT-GII, GIIM (pfam08388), pbpG (PRK11669)

Seq: VZQO01000122.1 (1854 bp)
Overview 1 RT 1: 87-1302 bp Neighborhood of RT #1 [87, 1454] RVT-GII GIIM Feature: gene Location: 87-1454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 420-1035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 420-103 5 bp Feature: domain Description: GIIM Note: maturase Location: 1095-1302 bp Feature: domain Description: GIIM Note: maturase Location: 1095-13 02 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VZQO01000009.1 (191688 bp)
Overview 1 RT 1: 158976-162466 bp Neighborhood of RT #1 [158976, 162471] MFS_PcaK_like RVT-GII PnbA MhpD Feature: gene Location: 158976-160133 bp Feature: domain Description: MFS_PcaK_like Location: 159048-160131 bp Feature: domain Description: MFS_PcaK_like Location: 15904 8-160131 bp Feature: gene Location: 160161-160334 bp Feature: gene Location: 160371-160616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 160443-160539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1604 4 3-160539 bp Feature: gene Location: 160774-161532 bp Feature: domain Description: PnbA Location: 160897-161092 bp Feature: domain Description: PnbA Location: 160897-161092 bp Feature: gene Location: 161773-162471 bp Feature: domain Description: MhpD Location: 161830-162466 bp Feature: domain Description: MhpD Location: 161830-1624 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_PcaK_like (cd17365), RVT-GII, PnbA (COG2272), MhpD (COG3971)

Seq: VZQO01000004.1 (244940 bp)
Overview 1 RT 1: 158092-162625 bp Neighborhood of RT #1 [158092, 162738] Resolvase Recombinase Zn_ribbon_recom RVT-GII GIIM Carbam_trans_N Carbam_trans_C Feature: gene Location: 158092-159090 bp Feature: domain Description: Resolvase Location: 158275-158530 bp Feature: domain Description: Resolvase Location: 15 8275 -15 85 30 bp Feature: domain Description: Recombinase Location: 158626-158986 bp Feature: domain Description: Recombinase Location: 15 8626-15 8986 bp Feature: gene Location: 159087-159770 bp Feature: domain Description: Zn_ribbon_recom Location: 159111-159237 bp Feature: domain Description: Zn_ribbon_recom Location: 15 9111-15 9237 bp Feature: gene Location: 159823-160293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159829-160027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 9829-160027 bp Feature: domain Description: GIIM Note: maturase Location: 160108-160291 bp Feature: domain Description: GIIM Note: maturase Location: 160108-160291 bp Feature: gene Location: 160420-160566 bp Feature: gene Location: 161017-162738 bp Feature: domain Description: Carbam_trans_N Location: 161023-162055 bp Feature: domain Description: Carbam_trans_N Location: 161023-16205 5 bp Feature: domain Description: Carbam_trans_C Location: 162181-162625 bp Feature: domain Description: Carbam_trans_C Location: 162181-162625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, GIIM (pfam08388), Carbam_trans_N (pfam02543), Carbam_trans_C (pfam16861)