myRT

myRT report for GCA_014397785.1_ASM1439778v1

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Seq: VZQQ01000075.1 (26357 bp)
Overview 1 RT 1: 21063-26041 bp Neighborhood of RT #1 [21063, 26181] IclR nifA RVT-GII GIIM PRK11161 IstB_IS21 Feature: gene Location: 21063-21500 bp Feature: domain Description: IclR Location: 21069-21468 bp Feature: domain Description: IclR Location: 21 069-21 468 bp Feature: gene Location: 21923-23818 bp Feature: domain Description: nifA Location: 22139-23816 bp Feature: domain Description: nifA Location: 221 39-2381 6 bp Feature: gene Location: 23964-24476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23991-24165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23991 -241 65 bp Feature: domain Description: GIIM Note: maturase Location: 24219-24453 bp Feature: domain Description: GIIM Note: maturase Location: 2421 9-24453 bp Feature: gene Location: 24876-25664 bp Feature: domain Description: PRK11161 Location: 24966-25650 bp Feature: domain Description: PRK1 1 1 61 Location: 24966-25650 bp Feature: gene Location: 25741-26181 bp Feature: domain Description: IstB_IS21 Location: 25747-26041 bp Feature: domain Description: IstB_IS21 Location: 25747-26041 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VZQQ01000095.1 (17610 bp)
Overview 1 RT 1: 15212-17495 bp Neighborhood of RT #1 [15212, 17509] SnoaL Tnp_DNA_bind RVT-GII Rve Feature: gene Location: 15212-15622 bp Feature: domain Description: SnoaL Location: 15281-15596 bp Feature: domain Description: SnoaL Location: 152 81-15596 bp Feature: gene Location: 16007-16654 bp Feature: domain Description: Tnp_DNA_bind Location: 16040-16211 bp Feature: domain Description: Tnp_DNA_bind Location: 16040-162 11 bp Feature: gene Location: 16818-17144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16824-17007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1682 4-17007 bp Feature: gene Location: 17234-17509 bp Feature: domain Description: Rve Location: 17303-17495 bp Feature: domain Description: Rve Location: 17303-17495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VZQQ01000056.1 (39247 bp)
Overview 1 RT 1: 24928-28578 bp Neighborhood of RT #1 [24928, 28589] RVT-GII GMC_oxred_C hisG hisZ Feature: gene Location: 24928-25311 bp Feature: gene Location: 25521-25745 bp Feature: gene Location: 25860-26672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25866-26277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25866-26277 bp Feature: domain Description: GMC_oxred_C Location: 26463-26628 bp Feature: domain Description: GMC_oxred_C Location: 26463 -26628 bp Feature: gene Location: 26746-27453 bp Feature: domain Description: hisG Location: 26749-27427 bp Feature: domain Description: hisG Location: 26749-27427 bp Feature: gene Location: 27450-28589 bp Feature: domain Description: hisZ Location: 27483-28578 bp Feature: domain Description: hisZ Location: 27483 -28578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VZQQ01000066.1 (31339 bp)
Overview 1 RT 1: 25614-31336 bp Neighborhood of RT #1 [25614, 31338] ArnT Xcc1710_like RVT_N RVT-GII GIIM HNHc PRK09265 Feature: gene Location: 25614-27359 bp Feature: domain Description: ArnT Location: 25641-27282 bp Feature: domain Description: ArnT Location: 2564 1-27282 bp Feature: gene Location: 27478-27942 bp Feature: domain Description: Xcc1710_like Location: 27607-27931 bp Feature: domain Description: Xcc1710_like Location: 27607-27931 bp Feature: gene Location: 29136-30737 bp Feature: domain Description: RVT_N Location: 29139-29337 bp Feature: domain Description: RVT_N Location: 29139-29337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29382-30030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29382-30030 bp Feature: domain Description: GIIM Note: maturase Location: 30081-30315 bp Feature: domain Description: GIIM Note: maturase Location: 30081-30315 bp Feature: domain Description: HNHc Note: nucleases Location: 30537-30699 bp Feature: domain Description: HNHc Note: nucleases Location: 30537-30699 bp Feature: gene Location: 30862-31338 bp Feature: domain Description: PRK09265 Location: 31063-31336 bp Feature: domain Description: PRK09265 Location: 31063-31336 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VZQQ01000010.1 (270489 bp)
Overview 1 RT 1: 76477-84030 bp Neighborhood of RT #1 [76477, 84059] degP_htrA_DO DUF836 RVT-GII GIIM HNH PRK05433 PRK10861 PRK10861 Feature: gene Location: 76477-77988 bp Feature: domain Description: degP_htrA_DO Location: 76582-77959 bp Feature: domain Description: degP_htrA_DO Location: 765 82-7795 9 bp Feature: gene Location: 77985-78257 bp Feature: domain Description: DUF836 Location: 78006-78222 bp Feature: domain Description: DUF836 Location: 78006-78222 bp Feature: gene Location: 79873-81177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79876-80461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79876-80461 bp Feature: domain Description: GIIM Note: maturase Location: 80515-80749 bp Feature: domain Description: GIIM Note: maturase Location: 805 15 -80749 bp Feature: domain Description: HNH Note: nucleases Location: 81001-81136 bp Feature: domain Description: HNH Note: nucleases Location: 81001-81136 bp Feature: gene Location: 81354-83147 bp Feature: domain Description: PRK05433 Location: 81357-83142 bp Feature: domain Description: PRK05 433 Location: 8135 7-83142 bp Feature: gene Location: 83166-84059 bp Feature: domain Description: PRK10861 Location: 83175-83700 bp Feature: domain Description: PRK10861 Location: 83175 -83700 bp Feature: domain Description: PRK10861 Location: 83898-84030 bp Feature: domain Description: PRK10861 Location: 83898-84030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VZQQ01000023.1 (99979 bp)
Overview 1 RT 1: 64226-72984 bp Neighborhood of RT #1 [64226, 73019] argJ PRK12904 RVT-GII GIIM HNHc DciA LpxC Feature: gene Location: 64226-65467 bp Feature: domain Description: argJ Location: 64265-65465 bp Feature: domain Description: argJ Location: 6 426 5-6 546 5 bp Feature: gene Location: 65621-68443 bp Feature: domain Description: PRK12904 Location: 65633-68435 bp Feature: domain Description: PRK12904 Location: 6 56 33-6 8435 bp Feature: gene Location: 68645-69943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68648-69236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 86 48-6 9236 bp Feature: domain Description: GIIM Note: maturase Location: 69290-69521 bp Feature: domain Description: GIIM Note: maturase Location: 6 9290-6 9521 bp Feature: domain Description: HNHc Note: nucleases Location: 69737-69905 bp Feature: domain Description: HNHc Note: nucleases Location: 6 9737-6 9905 bp Feature: gene Location: 71427-72041 bp Feature: domain Description: DciA Location: 71625-71880 bp Feature: domain Description: DciA Location: 716 25-71880 bp Feature: gene Location: 72102-73019 bp Feature: domain Description: LpxC Location: 72105-72984 bp Feature: domain Description: LpxC Location: 72105-72984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VZQQ01000082.1 (22794 bp)
Overview 1 RT 1: 17520-22784 bp Neighborhood of RT #1 [17520, 22792] HTH_LacI PBP1_GntR_like_2 PRK09692 RVT-GII GIIM Dimer_Tnp_Tn5 Feature: gene Location: 17520-18614 bp Feature: domain Description: HTH_LacI Location: 17538-17688 bp Feature: domain Description: HTH_LacI Location: 17 538-17 688 bp Feature: domain Description: PBP1_GntR_like_2 Location: 17706-18522 bp Feature: domain Description: PBP1_GntR_like_2 Location: 17 7 06-18522 bp Feature: gene Location: 19026-20243 bp Feature: domain Description: PRK09692 Location: 19032-20217 bp Feature: domain Description: PRK09692 Location: 19032-20217 bp Feature: gene Location: 20770-22131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21097-21712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21097 -217 12 bp Feature: domain Description: GIIM Note: maturase Location: 21772-21979 bp Feature: domain Description: GIIM Note: maturase Location: 217 7 2-2197 9 bp Feature: gene Location: 22592-22792 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 22634-22784 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 22634-227 84 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT