myRT

myRT report for GCA_014489865.1_ASM1448986v1

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Seq: JACGXW010000124.1 (14995 bp)
Overview 1 RT 1: 8377-12102 bp Neighborhood of RT #1 [8377, 12113] RVT_N RVT_N RVT-GII GIIM HNHc Thioredoxin Feature: gene Location: 8377-8595 bp Feature: gene Location: 8880-9104 bp Feature: domain Description: RVT_N Location: 8949-9099 bp Feature: domain Description: RVT_N Location: 8949-9099 bp Feature: gene Location: 9126-9845 bp Feature: domain Description: RVT_N Location: 9165-9246 bp Feature: domain Description: RVT_N Location: 91 65-9246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9291-9840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9291 -9840 bp Feature: gene Location: 9942-10721 bp Feature: domain Description: GIIM Note: maturase Location: 10068-10278 bp Feature: domain Description: GIIM Note: maturase Location: 1 0068-1 0278 bp Feature: domain Description: HNHc Note: nucleases Location: 10512-10671 bp Feature: domain Description: HNHc Note: nucleases Location: 1 051 2-1 0671 bp Feature: gene Location: 11784-12113 bp Feature: domain Description: Thioredoxin Location: 11799-12102 bp Feature: domain Description: Thioredoxin Location: 1 1 799-1 21 02 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), Thioredoxin (pfam00085)

Seq: JACGXW010000335.1 (1478 bp)
Overview 1 RT 1: 124-1477 bp Neighborhood of RT #1 [124, 1477] RVT-GII GIIM HNHc Feature: gene Location: 124-1140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130-478 bp Feature: domain Description: GIIM Note: maturase Location: 583-784 bp Feature: domain Description: GIIM Note: maturase Location: 583-784 bp Feature: domain Description: HNHc Note: nucleases Location: 1027-1135 bp Feature: domain Description: HNHc Note: nucleases Location: 102 7-1135 bp Feature: gene Location: 1304-1477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JACGXW010000245.1 (3556 bp)
Overview 1 RT 1: 17-2655 bp Neighborhood of RT #1 [17, 2655] InsQ RVT_N RVT-GII group_II_RT_mat McrA Feature: gene Location: 17-1294 bp Feature: domain Description: InsQ Location: 89-1199 bp Feature: domain Description: InsQ Location: 89-1199 bp Feature: gene Location: 1233-3140 bp Feature: domain Description: RVT_N Location: 1281-1527 bp Feature: domain Description: RVT_N Location: 1281-1527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1569-2238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1569-223 8 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2517-2631 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2517-263 1 bp Feature: domain Description: McrA Location: 2760-3030 bp Feature: domain Description: McrA Location: 2760-3 03 0 bp Feature: gene Location: 2088-2216 bp Feature: gene Location: 2284-2655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, group_II_RT_mat (TIGR04416), McrA (COG4058)

Seq: JACGXW010000229.1 (4240 bp)
Overview 1 RT 1: 842-3558 bp Neighborhood of RT #1 [842, 3566] RVT_N RVT-GII RVT-GII GIIM Feature: gene Location: 842-1099 bp Feature: gene Location: 1382-1978 bp Feature: domain Description: RVT_N Location: 1451-1694 bp Feature: domain Description: RVT_N Location: 14 51-1694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1739-1952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1739-1952 bp Feature: gene Location: 2116-2526 bp Feature: gene Location: 2594-2821 bp Feature: gene Location: 2841-3566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2847-3273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 284 7-3273 bp Feature: domain Description: GIIM Note: maturase Location: 3378-3558 bp Feature: domain Description: GIIM Note: maturase Location: 3378-3558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JACGXW010000381.1 (1079 bp)
Overview 1 RT 1: 329-963 bp Neighborhood of RT #1 [329, 1007] RVT_N RVT-GII Feature: gene Location: 329-553 bp Feature: domain Description: RVT_N Location: 398-548 bp Feature: domain Description: RVT_N Location: 398-5 48 bp Feature: gene Location: 684-1007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 759-963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75 9-963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JACGXW010000341.1 (1409 bp)
Overview 1 RT 1: 122-1389 bp Neighborhood of RT #1 [122, 1406] RVT-GII GIIM RVT-GII Feature: gene Location: 122-823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 167-383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16 7-383 bp Feature: domain Description: GIIM Note: maturase Location: 488-719 bp Feature: domain Description: GIIM Note: maturase Location: 488-719 bp Feature: gene Location: 987-1406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1182-1389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1182-1389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACGXW010000306.1 (1952 bp)
Overview 1 RT 1: 696-1950 bp Neighborhood of RT #1 [696, 1949] RVT_N RVT-GII Feature: gene Location: 696-917 bp Feature: gene Location: 1274-1411 bp Feature: gene Location: 1440-1949 bp Feature: domain Description: RVT_N Location: 1443-1584 bp Feature: domain Description: RVT_N Location: 1443-1584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1629-1950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1629-1950 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JACGXW010000020.1 (57051 bp)
Overview 1 RT 1: 14364-19357 bp Neighborhood of RT #1 [14364, 19380] COG5549 secG RVT_N RVT-GII GIIM HNHc MFS_MefA_like Feature: gene Location: 14364-15035 bp Feature: domain Description: COG5549 Location: 14436-15006 bp Feature: domain Description: COG5549 Location: 14436-15006 bp Feature: gene Location: 15071-15301 bp Feature: domain Description: secG Location: 15086-15287 bp Feature: domain Description: secG Location: 1508 6-1528 7 bp Feature: gene Location: 15426-17189 bp Feature: domain Description: RVT_N Location: 15492-15735 bp Feature: domain Description: RVT_N Location: 15492-15735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15780-16449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1578 0-16449 bp Feature: domain Description: GIIM Note: maturase Location: 16554-16761 bp Feature: domain Description: GIIM Note: maturase Location: 16554-16761 bp Feature: domain Description: HNHc Note: nucleases Location: 16998-17157 bp Feature: domain Description: HNHc Note: nucleases Location: 16998 -17157 bp Feature: gene Location: 17472-17747 bp Feature: gene Location: 17797-19380 bp Feature: domain Description: MFS_MefA_like Location: 18142-19357 bp Feature: domain Description: MFS_MefA_like Location: 18 142-19357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5549 (Predicted Zn-dependent protease ), secG (TIGR00810), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), MFS_MefA_like (cd06173)

Seq: JACGXW010000339.1 (1464 bp)
Overview 1 RT 1: 78-1461 bp Neighborhood of RT #1 [78, 1461] RVT_N RVT-GII Feature: gene Location: 78-1220 bp Feature: domain Description: RVT_N Location: 117-360 bp Feature: domain Description: RVT_N Location: 117-360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-1077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-1077 bp Feature: gene Location: 1273-1461 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JACGXW010000289.1 (2285 bp)
Overview 1 RT 1: 223-2284 bp Neighborhood of RT #1 [223, 2284] RVT-GII GIIM HNHc Feature: gene Location: 223-1701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280-949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280-949 bp Feature: domain Description: GIIM Note: maturase Location: 1048-1279 bp Feature: domain Description: GIIM Note: maturase Location: 10 48-1279 bp Feature: domain Description: HNHc Note: nucleases Location: 1492-1639 bp Feature: domain Description: HNHc Note: nucleases Location: 1492-1639 bp Feature: gene Location: 1994-2284 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JACGXW010000183.1 (7402 bp)
Overview 1 RT 1: 140-6153 bp Neighborhood of RT #1 [140, 6170] RVT-GII RVT_N RVT_N RVT-GII RVT-GII GIIM McrA BaeS rpsU Feature: gene Location: 140-433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 212-407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 212-407 bp Feature: gene Location: 324-737 bp Feature: domain Description: RVT_N Location: 393-636 bp Feature: domain Description: RVT_N Location: 393-636 bp Feature: gene Location: 1106-1279 bp Feature: gene Location: 1496-1741 bp Feature: gene Location: 1897-2127 bp Feature: gene Location: 2899-3501 bp Feature: domain Description: RVT_N Location: 2968-3211 bp Feature: domain Description: RVT_N Location: 2968-3211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3256-3484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3256-3484 bp Feature: gene Location: 3575-4678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3578-3926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3578-3926 bp Feature: domain Description: GIIM Note: maturase Location: 4025-4247 bp Feature: domain Description: GIIM Note: maturase Location: 4025-4247 bp Feature: domain Description: McrA Location: 4361-4652 bp Feature: domain Description: McrA Location: 4361-4652 bp Feature: gene Location: 4691-5884 bp Feature: domain Description: BaeS Location: 4769-5873 bp Feature: domain Description: BaeS Location: 4769-5873 bp Feature: gene Location: 5973-6170 bp Feature: domain Description: rpsU Location: 5976-6153 bp Feature: domain Description: rpsU Location: 5976-6153 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT_N (pfam13655), GIIM (pfam08388), McrA (COG4058), BaeS (COG0642), rpsU (PRK00270)

Seq: JACGXW010000011.1 (72991 bp)
Overview 1 RT 1: 60-4326 bp Neighborhood of RT #1 [60, 4385] RVT_N RVT-GII GIIM HNHc UgpE DUF3153 Feature: gene Location: 60-1811 bp Feature: domain Description: RVT_N Location: 99-342 bp Feature: domain Description: RVT_N Location: 99-342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 387-1059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 387-1059 bp Feature: domain Description: GIIM Note: maturase Location: 1158-1365 bp Feature: domain Description: GIIM Note: maturase Location: 1158-1365 bp Feature: domain Description: HNHc Note: nucleases Location: 1602-1743 bp Feature: domain Description: HNHc Note: nucleases Location: 1602-1743 bp Feature: gene Location: 2689-3504 bp Feature: domain Description: UgpE Location: 2716-3499 bp Feature: domain Description: UgpE Location: 2716-3499 bp Feature: gene Location: 3588-4385 bp Feature: domain Description: DUF3153 Location: 3669-4326 bp Feature: domain Description: DUF3153 Location: 3669-4326 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), UgpE (COG0395), DUF3153 (pfam11353)

Seq: JACGXW010000217.1 (4883 bp)
Overview 1 RT 1: 154-4408 bp Neighborhood of RT #1 [154, 4485] argC RVT_N RVT-GII GIIM WcaA TPR TPR Feature: gene Location: 154-1185 bp Feature: domain Description: argC Location: 157-1183 bp Feature: domain Description: argC Location: 157-1183 bp Feature: gene Location: 1310-2482 bp Feature: domain Description: RVT_N Location: 1418-1532 bp Feature: domain Description: RVT_N Location: 1418-1532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1880-2090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1880-2090 bp Feature: domain Description: GIIM Note: maturase Location: 2177-2402 bp Feature: domain Description: GIIM Note: maturase Location: 2177-2402 bp Feature: gene Location: 2940-3152 bp Feature: gene Location: 3292-4485 bp Feature: domain Description: WcaA Location: 3295-3706 bp Feature: domain Description: WcaA Location: 3295-3706 bp Feature: domain Description: TPR Location: 3826-4093 bp Feature: domain Description: TPR Location: 3826-4093 bp Feature: domain Description: TPR Location: 4129-4408 bp Feature: domain Description: TPR Location: 4129-4408 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT argC (TIGR01850), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), WcaA (TIGR04017), TPR (smart00028)

Seq: JACGXW010000040.1 (36900 bp)
Overview 1 RT 1: 241-2507 bp Neighborhood of RT #1 [241, 2507] RVT-GII GIIM McrA Feature: gene Location: 241-1251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 253-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 253-478 bp Feature: domain Description: GIIM Note: maturase Location: 586-793 bp Feature: domain Description: GIIM Note: maturase Location: 586-793 bp Feature: domain Description: McrA Location: 949-1210 bp Feature: domain Description: McrA Location: 949-1210 bp Feature: gene Location: 1872-2183 bp Feature: gene Location: 2334-2507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JACGXW010000110.1 (19368 bp)
Overview 1 RT 1: 683-2792 bp Neighborhood of RT #1 [683, 2812] RVT-GII GIIM HNHc Usp Feature: gene Location: 683-847 bp Feature: gene Location: 925-1428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931-1276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931-1276 bp Feature: gene Location: 1443-2033 bp Feature: domain Description: GIIM Note: maturase Location: 1446-1587 bp Feature: domain Description: GIIM Note: maturase Location: 1446-15 87 bp Feature: domain Description: HNHc Note: nucleases Location: 1824-1965 bp Feature: domain Description: HNHc Note: nucleases Location: 1824-1965 bp Feature: gene Location: 2336-2812 bp Feature: domain Description: Usp Location: 2345-2792 bp Feature: domain Description: Usp Location: 2345-2792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), Usp (pfam00582)

Seq: JACGXW010000182.1 (7429 bp)
Overview 1 RT 1: 3736-7423 bp Neighborhood of RT #1 [3736, 7428] RVT_N RVT-GII RVT-GII GIIM HNHc STKc_PknB_like YfmG Feature: gene Location: 3736-4053 bp Feature: gene Location: 4240-4377 bp Feature: gene Location: 4268-4840 bp Feature: domain Description: RVT_N Location: 4307-4550 bp Feature: domain Description: RVT_N Location: 4307-4550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4595-4823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4595-4823 bp Feature: gene Location: 4830-5255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4836-5253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4836-5253 bp Feature: gene Location: 5382-6020 bp Feature: domain Description: GIIM Note: maturase Location: 5388-5589 bp Feature: domain Description: GIIM Note: maturase Location: 5388-5589 bp Feature: domain Description: HNHc Note: nucleases Location: 5811-5958 bp Feature: domain Description: HNHc Note: nucleases Location: 5811-5958 bp Feature: gene Location: 6235-7428 bp Feature: domain Description: STKc_PknB_like Location: 6241-6514 bp Feature: domain Description: STKc_PknB_like Location: 6241-6514 bp Feature: domain Description: YfmG Location: 6550-7423 bp Feature: domain Description: YfmG Location: 6550-7423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), STKc_PknB_like (cd14014), YfmG (COG1262)

Seq: JACGXW010000100.1 (20504 bp)
Overview 1 RT 1: 628-6892 bp 2 RT 2: 14804-20477 bp Neighborhood of RT #1 [628, 6963] YjbI Pentapeptide RVT-CRISPR Cas1_I-II-III Cas1 Cas2_I_II_III Neighborhood of RT #2 [14804, 20503] Cmr3_III-B Cas10_III RVT-GII GIIM McrA Feature: gene Location: 628-1404 bp Feature: gene Location: 1465-2091 bp Feature: domain Description: YjbI Location: 1516-1789 bp Feature: domain Description: YjbI Location: 1516-17 89 bp Feature: domain Description: Pentapeptide Location: 1879-1978 bp Feature: domain Description: Pentapeptide Location: 1879-1978 bp Feature: gene Location: 3468-5477 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3696-4299 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3696-4299 bp Feature: domain Description: Cas1_I-II-III Location: 4479-5436 bp Feature: domain Description: Cas1_I-II-III Location: 4479-5436 bp Feature: gene Location: 5756-6652 bp Feature: domain Description: Cas1 Location: 5762-6641 bp Feature: domain Description: Cas1 Location: 5762-6641 bp Feature: gene Location: 6649-6963 bp Feature: domain Description: Cas2_I_II_III Location: 6661-6892 bp Feature: domain Description: Cas2_I_II_III Location: 6661-6892 bp Feature: gene Location: 14804-15967 bp Feature: domain Description: Cmr3_III-B Location: 14822-15959 bp Feature: domain Description: Cmr3_III-B Location: 14822-15959 bp Feature: gene Location: 15968-18925 bp Feature: domain Description: Cas10_III Location: 16133-18344 bp Feature: domain Description: Cas10_III Location: 16133-18344 bp Feature: gene Location: 19127-20503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19130-19745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19130-19745 bp Feature: domain Description: GIIM Note: maturase Location: 19850-20063 bp Feature: domain Description: GIIM Note: maturase Location: 19850-20063 bp Feature: domain Description: McrA Location: 20219-20477 bp Feature: domain Description: McrA Location: 20219-20477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YjbI (COG2346), Pentapeptide (pfam00805), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas1 (COG1518), Cas2_I_II_III (cl11442), Cmr3_III-B (cd09748), Cas10_III (cl21742), RVT-GII, GIIM (pfam08388)
McrA (COG4058)

Seq: JACGXW010000291.1 (2261 bp)
Overview 1 RT 1: 167-2161 bp Neighborhood of RT #1 [167, 2161] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 167-577 bp Feature: domain Description: RVT_N Location: 206-287 bp Feature: domain Description: RVT_N Location: 206-287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332-560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332-560 bp Feature: gene Location: 567-1841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 573-996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 573-996 bp Feature: domain Description: GIIM Note: maturase Location: 1104-1311 bp Feature: domain Description: GIIM Note: maturase Location: 1104-1311 bp Feature: domain Description: McrA Location: 1440-1731 bp Feature: domain Description: McrA Location: 1440-1731 bp Feature: gene Location: 2006-2161 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JACGXW010000013.1 (69620 bp)
Overview 1 RT 1: 66996-69516 bp Neighborhood of RT #1 [66996, 69524] COG4828 RVT_N RVT-GII GIIM Feature: gene Location: 66996-67367 bp Feature: domain Description: COG4828 Location: 67035-67335 bp Feature: domain Description: COG4828 Location: 67035-67335 bp Feature: gene Location: 67377-67514 bp Feature: gene Location: 68196-69524 bp Feature: domain Description: RVT_N Location: 68262-68505 bp Feature: domain Description: RVT_N Location: 68262-68505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68550-69219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68550-69219 bp Feature: domain Description: GIIM Note: maturase Location: 69354-69516 bp Feature: domain Description: GIIM Note: maturase Location: 69354-69516 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4828 (Uncharacterized membrane protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JACGXW010000286.1 (2430 bp)
Overview 1 RT 1: 229-2429 bp Neighborhood of RT #1 [229, 2429] ParE_toxin RVT-GII GIIM HNHc Feature: gene Location: 229-531 bp Feature: domain Description: ParE_toxin Location: 244-505 bp Feature: domain Description: ParE_toxin Location: 244-505 bp Feature: gene Location: 1062-2186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1065-1428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1065-1428 bp Feature: domain Description: GIIM Note: maturase Location: 1533-1734 bp Feature: domain Description: GIIM Note: maturase Location: 1533-1734 bp Feature: domain Description: HNHc Note: nucleases Location: 1968-2133 bp Feature: domain Description: HNHc Note: nucleases Location: 1968-2133 bp Feature: gene Location: 2244-2429 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE_toxin (pfam05016), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JACGXW010000010.1 (74045 bp)
Overview 1 RT 1: 70339-73916 bp Neighborhood of RT #1 [70339, 73921] GIIM HNHc RVT-GII RVT_N RVT-GII RVT_N Feature: gene Location: 70339-71559 bp Feature: gene Location: 72097-72720 bp Feature: domain Description: GIIM Note: maturase Location: 72103-72316 bp Feature: domain Description: GIIM Note: maturase Location: 721 03-72316 bp Feature: domain Description: HNHc Note: nucleases Location: 72529-72670 bp Feature: domain Description: HNHc Note: nucleases Location: 72529-72670 bp Feature: gene Location: 72767-73138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72773-73064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72773-73064 bp Feature: gene Location: 73142-73675 bp Feature: domain Description: RVT_N Location: 73181-73262 bp Feature: domain Description: RVT_N Location: 73181-73262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73307-73673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73307-73673 bp Feature: gene Location: 73697-73921 bp Feature: domain Description: RVT_N Location: 73766-73916 bp Feature: domain Description: RVT_N Location: 73766-73916 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), HNHc (smart00507), RVT-GII, RVT_N (pfam13655)

Seq: JACGXW010000012.1 (72748 bp)
Overview 1 RT 1: 33111-41282 bp Neighborhood of RT #1 [33111, 41287] COG3744 NagA RVT_N RVT-GII GIIM DUF2839 DUF1815 RVT-GII KOG4178 Feature: gene Location: 33111-33512 bp Feature: domain Description: COG3744 Location: 33120-33489 bp Feature: domain Description: COG3744 Location: 33120-33489 bp Feature: gene Location: 33568-34770 bp Feature: domain Description: NagA Location: 33649-34648 bp Feature: domain Description: NagA Location: 33649-34648 bp Feature: gene Location: 35485-36990 bp Feature: domain Description: RVT_N Location: 35530-35776 bp Feature: domain Description: RVT_N Location: 35530-35776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35860-36484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35860-36484 bp Feature: domain Description: GIIM Note: maturase Location: 36589-36817 bp Feature: domain Description: GIIM Note: maturase Location: 36589-36817 bp Feature: gene Location: 37080-37259 bp Feature: domain Description: DUF2839 Location: 37107-37248 bp Feature: domain Description: DUF2839 Location: 37107-37248 bp Feature: gene Location: 37676-38020 bp Feature: domain Description: DUF1815 Location: 37682-37973 bp Feature: domain Description: DUF1815 Location: 37682-37973 bp Feature: gene Location: 39029-39421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39254-39416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39254-39416 bp Feature: gene Location: 39941-40153 bp Feature: gene Location: 40403-41287 bp Feature: domain Description: KOG4178 Location: 40433-41282 bp Feature: domain Description: KOG4178 Location: 40433-41282 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3744 (PIN domain nuclease, a component of toxin-antitoxin system (PIN domain) ), NagA (COG1820), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF2839 (pfam10999), DUF1815 (pfam08844), KOG4178 (KOG4178, Soluble epoxide hydrolase )

Seq: JACGXW010000187.1 (6863 bp)
Overview 1 RT 1: 5141-6745 bp Neighborhood of RT #1 [5141, 6771] RVT_N RVT_N RVT-GII RVT-GII Feature: gene Location: 5141-5395 bp Feature: gene Location: 5781-6002 bp Feature: domain Description: RVT_N Location: 5847-5997 bp Feature: domain Description: RVT_N Location: 5847-5997 bp Feature: gene Location: 6024-6434 bp Feature: domain Description: RVT_N Location: 6063-6144 bp Feature: domain Description: RVT_N Location: 6063-6144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6189-6417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6189-6417 bp Feature: gene Location: 6424-6771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6430-6745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6430-6745 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JACGXW010000351.1 (1332 bp)
Overview 1 RT 1: 1-1161 bp Neighborhood of RT #1 [1, 1161] RVT_N RVT-GII Feature: gene Location: 1-378 bp Feature: domain Description: RVT_N Location: 7-100 bp Feature: domain Description: RVT_N Location: 7-100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145-379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145-379 bp Feature: gene Location: 604-825 bp Feature: gene Location: 955-1161 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JACGXW010000266.1 (2927 bp)
Overview 1 RT 1: 1-2589 bp Neighborhood of RT #1 [1, 2589] DDE_3 RVT_N RVT-GII GIIM Feature: gene Location: 1-138 bp Feature: domain Description: DDE_3 Location: 4-100 bp Feature: domain Description: DDE_3 Location: 4-100 bp Feature: gene Location: 484-618 bp Feature: gene Location: 634-2124 bp Feature: domain Description: RVT_N Location: 688-931 bp Feature: domain Description: RVT_N Location: 688-931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 982-1660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 982-1660 bp Feature: domain Description: GIIM Note: maturase Location: 1714-1948 bp Feature: domain Description: GIIM Note: maturase Location: 1714-1948 bp Feature: gene Location: 2371-2589 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JACGXW010000226.1 (4336 bp)
Overview 1 RT 1: 3-3638 bp Neighborhood of RT #1 [3, 3658] RVT-GII McrA SMC_prok_B SMC_prok_B Feature: gene Location: 3-152 bp Feature: gene Location: 299-640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 305-605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 305-605 bp Feature: gene Location: 902-1390 bp Feature: domain Description: McrA Location: 1079-1364 bp Feature: domain Description: McrA Location: 1079-1364 bp Feature: gene Location: 1907-3658 bp Feature: domain Description: SMC_prok_B Location: 2105-2885 bp Feature: domain Description: SMC_prok_B Location: 2105-2885 bp Feature: domain Description: SMC_prok_B Location: 2942-3638 bp Feature: domain Description: SMC_prok_B Location: 2942-3638 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, McrA (COG4058), SMC_prok_B (TIGR02168)

Seq: JACGXW010000067.1 (27992 bp)
Overview 1 RT 1: 24131-27689 bp Neighborhood of RT #1 [24131, 27689] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 24131-24295 bp Feature: gene Location: 24581-24787 bp Feature: gene Location: 25099-26850 bp Feature: domain Description: RVT_N Location: 25138-25381 bp Feature: domain Description: RVT_N Location: 25138-25381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25426-26092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25426-26092 bp Feature: domain Description: GIIM Note: maturase Location: 26197-26407 bp Feature: domain Description: GIIM Note: maturase Location: 26197-26407 bp Feature: domain Description: HNHc Note: nucleases Location: 26641-26800 bp Feature: domain Description: HNHc Note: nucleases Location: 26641-26800 bp Feature: gene Location: 27249-27689 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JACGXW010000263.1 (2991 bp)
Overview 1 RT 1: 223-2686 bp Neighborhood of RT #1 [223, 2823] DUF2973 DUF2605 RVT_N RVT-GII GIIM McrA Feature: gene Location: 223-534 bp Feature: domain Description: DUF2973 Location: 226-445 bp Feature: domain Description: DUF2973 Location: 226-445 bp Feature: gene Location: 729-1070 bp Feature: domain Description: DUF2605 Location: 750-1029 bp Feature: domain Description: DUF2605 Location: 750-1029 bp Feature: gene Location: 1120-2823 bp Feature: domain Description: RVT_N Location: 1159-1240 bp Feature: domain Description: RVT_N Location: 1159-1240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1285-1954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 128 5-1954 bp Feature: domain Description: GIIM Note: maturase Location: 2065-2272 bp Feature: domain Description: GIIM Note: maturase Location: 2065-2272 bp Feature: domain Description: McrA Location: 2437-2686 bp Feature: domain Description: McrA Location: 2437-2686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2973 (pfam11189), DUF2605 (pfam10792), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JACGXW010000276.1 (2736 bp)
Overview 1 RT 1: 946-2734 bp Neighborhood of RT #1 [946, 2734] DNA_processg_A RVT-GII GIIM Feature: gene Location: 946-1449 bp Feature: domain Description: DNA_processg_A Location: 1015-1261 bp Feature: domain Description: DNA_processg_A Location: 1015-1261 bp Feature: gene Location: 1705-1929 bp Feature: gene Location: 1993-2574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2023-2248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2023-2248 bp Feature: domain Description: GIIM Note: maturase Location: 2371-2563 bp Feature: domain Description: GIIM Note: maturase Location: 2371-2563 bp Feature: gene Location: 2486-2734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA_processg_A (pfam02481), RVT-GII, GIIM (pfam08388)

Seq: JACGXW010000303.1 (2027 bp)
Overview 1 RT 1: 2-1904 bp Neighborhood of RT #1 [2, 1951] COG3415 RVT_N RVT-GII Feature: gene Location: 2-232 bp Feature: domain Description: COG3415 Location: 11-203 bp Feature: domain Description: COG3415 Location: 11-203 bp Feature: gene Location: 255-470 bp Feature: gene Location: 1367-1951 bp Feature: domain Description: RVT_N Location: 1409-1649 bp Feature: domain Description: RVT_N Location: 1409-1649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1694-1904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1694-1904 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3415 (Transposase ), RVT_N (pfam13655), RVT-GII

Seq: JACGXW010000061.1 (30335 bp)
Overview 1 RT 1: 13969-17328 bp Neighborhood of RT #1 [13969, 17780] PRK07459 RVT_N RVT-GII GIIM NAD_bind_1_Glu_DH Lys9 Feature: gene Location: 13969-14244 bp Feature: domain Description: PRK07459 Location: 13972-14221 bp Feature: domain Description: PRK07459 Location: 13972-14221 bp Feature: gene Location: 14315-14458 bp Feature: gene Location: 14484-15992 bp Feature: domain Description: RVT_N Location: 14514-14760 bp Feature: domain Description: RVT_N Location: 14514-14760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14802-15462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14802-15462 bp Feature: domain Description: GIIM Note: maturase Location: 15564-15801 bp Feature: domain Description: GIIM Note: maturase Location: 15564-15801 bp Feature: gene Location: 16073-16288 bp Feature: gene Location: 16761-17780 bp Feature: domain Description: NAD_bind_1_Glu_DH Location: 16818-17013 bp Feature: domain Description: NAD_bind_1_Glu_DH Location: 16818-17013 bp Feature: domain Description: Lys9 Location: 17046-17328 bp Feature: domain Description: Lys9 Location: 17046-17328 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07459 (single-stranded DNA-binding protein; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), NAD_bind_1_Glu_DH (cd01076), Lys9 (COG1748)

Seq: JACGXW010000164.1 (8873 bp)
Overview 1 RT 1: 5818-8300 bp Neighborhood of RT #1 [5818, 8644] Crp PRK12309 RVT-GII group_II_RT_mat Feature: gene Location: 5818-6186 bp Feature: domain Description: Crp Location: 5854-6172 bp Feature: domain Description: Crp Location: 5854-6172 bp Feature: gene Location: 6427-7413 bp Feature: domain Description: PRK12309 Location: 6430-7408 bp Feature: domain Description: PRK12309 Location: 6430-7408 bp Feature: gene Location: 7622-8644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7628-7976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7628-7976 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 8039-8300 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 8039-8300 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Crp (pfam00325), PRK12309 (transaldolase), RVT-GII, group_II_RT_mat (TIGR04416)

Seq: JACGXW010000239.1 (3868 bp)
Overview 1 RT 1: 2-2470 bp Neighborhood of RT #1 [2, 2470] RVT_N RVT-GII RVT-GII GIIM Feature: gene Location: 2-208 bp Feature: gene Location: 395-994 bp Feature: domain Description: RVT_N Location: 461-704 bp Feature: domain Description: RVT_N Location: 461-704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 749-977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 749-977 bp Feature: gene Location: 1065-1799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1071-1416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1071-1416 bp Feature: domain Description: GIIM Note: maturase Location: 1551-1773 bp Feature: domain Description: GIIM Note: maturase Location: 1551-1773 bp Feature: gene Location: 1823-1990 bp Feature: gene Location: 2042-2470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JACGXW010000285.1 (2450 bp)
Overview 1 RT 1: 705-2352 bp Neighborhood of RT #1 [705, 2378] RVT-GII GIIM McrA Feature: gene Location: 705-2378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 978-1626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 978-1626 bp Feature: domain Description: GIIM Note: maturase Location: 1725-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1725-1935 bp Feature: domain Description: McrA Location: 2067-2352 bp Feature: domain Description: McrA Location: 2067-2352 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JACGXW010000022.1 (53292 bp)
Overview 1 RT 1: 35285-38378 bp Neighborhood of RT #1 [35285, 38545] RVT_N RVT-GII GIIM HNH Feature: gene Location: 35285-35455 bp Feature: gene Location: 36529-36753 bp Feature: domain Description: RVT_N Location: 36598-36748 bp Feature: domain Description: RVT_N Location: 36598-36748 bp Feature: gene Location: 37238-37573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37244-37571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37244-37571 bp Feature: gene Location: 37790-37954 bp Feature: domain Description: GIIM Note: maturase Location: 37796-37952 bp Feature: domain Description: GIIM Note: maturase Location: 37796-37952 bp Feature: gene Location: 38228-38545 bp Feature: domain Description: HNH Note: nucleases Location: 38267-38378 bp Feature: domain Description: HNH Note: nucleases Location: 38267-38378 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: JACGXW010000215.1 (5031 bp)
Overview 1 RT 1: 97-4634 bp Neighborhood of RT #1 [97, 4774] RVT_N RVT-GII GIIM PitA HemH Feature: gene Location: 97-1425 bp Feature: domain Description: RVT_N Location: 163-406 bp Feature: domain Description: RVT_N Location: 163-406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 451-1120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 451-1120 bp Feature: domain Description: GIIM Note: maturase Location: 1255-1417 bp Feature: domain Description: GIIM Note: maturase Location: 1255-1417 bp Feature: gene Location: 2192-3457 bp Feature: domain Description: PitA Location: 2225-3446 bp Feature: domain Description: PitA Location: 2225-3446 bp Feature: gene Location: 3560-4774 bp Feature: domain Description: HemH Location: 3650-4634 bp Feature: domain Description: HemH Location: 36 50-4634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PitA (COG0306), HemH (COG0276)

Seq: JACGXW010000391.1 (1039 bp)
Overview 1 RT 1: 99-906 bp Neighborhood of RT #1 [99, 926] RVT_N RVT-GII Feature: gene Location: 99-926 bp Feature: domain Description: RVT_N Location: 138-381 bp Feature: domain Description: RVT_N Location: 138-381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426-906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426-906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JACGXW010000259.1 (3086 bp)
Overview 1 RT 1: 3-2401 bp Neighborhood of RT #1 [3, 2401] DDE_3 RVT_N RVT-GII GIIM McrA Feature: gene Location: 3-128 bp Feature: domain Description: DDE_3 Location: 6-90 bp Feature: domain Description: DDE_3 Location: 6-90 bp Feature: gene Location: 565-2157 bp Feature: domain Description: RVT_N Location: 604-685 bp Feature: domain Description: RVT_N Location: 604-685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 730-1399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 730-1399 bp Feature: domain Description: GIIM Note: maturase Location: 1510-1714 bp Feature: domain Description: GIIM Note: maturase Location: 1510-1714 bp Feature: domain Description: McrA Location: 1873-2131 bp Feature: domain Description: McrA Location: 1873-2131 bp Feature: gene Location: 2264-2401 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)