myRT

myRT report for GCA_014493815.1_ASM1449381v1

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Seq: JACUWP010000003.1 Escherichia coli strain AI4300 3, whole genome shotgun sequence (309096 bp)
Overview 1 RT 1: 800-4270 bp Neighborhood of RT #1 [800, 4377] Arm-DNA-bind_3 RVT-Retrons PRK09678 Feature: gene Location: 800-1102 bp Feature: domain Description: Arm-DNA-bind_3 Location: 809-1061 bp Feature: domain Description: Arm-DNA-bind_3 Location: 809-1 061 bp Feature: gene Location: 1286-1531 bp Feature: gene Location: 1557-2489 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1659-2253 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 659-2253 bp Feature: gene Location: 2491-3477 bp Feature: gene Location: 4105-4377 bp Feature: domain Description: PRK09678 Location: 4114-4270 bp Feature: domain Description: PRK09678 Location: 41 1 4-4270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: JACUWP010000086.1 Escherichia coli strain AI4300 86, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACUWP010000009.1 Escherichia coli strain AI4300 9, whole genome shotgun sequence (181155 bp)
Overview 1 RT 1: 23835-28126 bp Neighborhood of RT #1 [23835, 28126] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 23835-25097 bp Feature: domain Description: YesM Location: 24348-25089 bp Feature: domain Description: YesM Location: 243 48-25089 bp Feature: gene Location: 25127-25297 bp Feature: gene Location: 25647-26168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25653-25935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25653 -2593 5 bp Feature: domain Description: GIIM Note: maturase Location: 25983-26163 bp Feature: domain Description: GIIM Note: maturase Location: 25983 -26163 bp Feature: gene Location: 26196-26735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26526-26604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26526-26604 bp Feature: gene Location: 26766-26963 bp Feature: gene Location: 27221-28126 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)