myRT

myRT report for GCA_014493855.1_ASM1449385v1

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Seq: JACUWM010000013.1 (110061 bp)
Overview 1 RT 1: 49187-53070 bp Neighborhood of RT #1 [49187, 53075] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 49187-49645 bp Feature: domain Description: dut Location: 49193-49640 bp Feature: domain Description: dut Location: 491 93-49640 bp Feature: gene Location: 49752-50348 bp Feature: domain Description: slmA Location: 49758-50334 bp Feature: domain Description: slmA Location: 49758-50334 bp Feature: gene Location: 50394-51353 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50529-51078 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50529-51 078 bp Feature: gene Location: 51651-52307 bp Feature: domain Description: pyrE Location: 51669-52302 bp Feature: domain Description: pyrE Location: 51 669-52302 bp Feature: gene Location: 52359-53075 bp Feature: domain Description: rph Location: 52362-53070 bp Feature: domain Description: rph Location: 52362-53070 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: JACUWM010000041.1 (20093 bp)
Overview 1 RT 1: 16368-19716 bp Neighborhood of RT #1 [16368, 19781] DDE_Tnp_Tn3 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 16368-16541 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 16371-16479 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 16371-16479 bp Feature: gene Location: 16623-17069 bp Feature: domain Description: PHA02517 Location: 16626-17064 bp Feature: domain Description: PHA02 517 Location: 1662 6-17064 bp Feature: gene Location: 17187-18710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17460-18192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17460-18192 bp Feature: domain Description: GIIM Note: maturase Location: 18267-18465 bp Feature: domain Description: GIIM Note: maturase Location: 182 67-18465 bp Feature: gene Location: 18664-19089 bp Feature: gene Location: 19302-19781 bp Feature: domain Description: PHA02517 Location: 19362-19716 bp Feature: domain Description: PHA02 517 Location: 19362 -19716 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_Tn3 (pfam01526), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JACUWM010000040.1 (20319 bp)
Overview 1 RT 1: 10068-14763 bp Neighborhood of RT #1 [10068, 14763] PRK10276 RVT-GII Intron_maturas2 HNHc PRK13704 Feature: gene Location: 10068-10487 bp Feature: domain Description: PRK10276 Location: 10107-10473 bp Feature: domain Description: PRK10276 Location: 10107-10473 bp Feature: gene Location: 10501-10710 bp Feature: gene Location: 10845-12746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11112-11943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11112-11943 bp Feature: domain Description: Intron_maturas2 Location: 12057-12315 bp Feature: domain Description: Intron_maturas2 Location: 12057-123 15 bp Feature: domain Description: HNHc Note: nucleases Location: 12489-12651 bp Feature: domain Description: HNHc Note: nucleases Location: 12489-12651 bp Feature: gene Location: 12974-14170 bp Feature: domain Description: PRK13704 Location: 13817-14162 bp Feature: domain Description: PRK13 704 Location: 13 817-14162 bp Feature: gene Location: 14167-14763 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13704 (plasmid SOS inhibition protein A; Provisional)

Seq: JACUWM010000042.1 (19722 bp)
Overview 1 RT 1: 1013-3524 bp Neighborhood of RT #1 [1013, 3524] RVT-UG17 SLATT_5 Feature: gene Location: 1013-1150 bp Feature: gene Location: 1166-1300 bp Feature: gene Location: 1408-2778 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1636-2242 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1636-224 2 bp Feature: gene Location: 2756-3307 bp Feature: domain Description: SLATT_5 Location: 2762-3278 bp Feature: domain Description: SLATT_5 Location: 2762-3278 bp Feature: gene Location: 3345-3524 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)