myRT

myRT report for GCA_014494025.1_ASM1449402v1

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Seq: JACUWD010000019.1 (89413 bp)
Overview 1 RT 1: 28739-34982 bp Neighborhood of RT #1 [28739, 35119] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 28739-29005 bp Feature: domain Description: Phage_integrase Location: 28805-28901 bp Feature: domain Description: Phage_integrase Location: 28805-28901 bp Feature: gene Location: 29088-29558 bp Feature: gene Location: 29905-33114 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30433-30922 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30433-30922 bp Feature: domain Description: nitrilase Location: 32428-33025 bp Feature: domain Description: nitrilase Location: 32428-33025 bp Feature: gene Location: 33409-34212 bp Feature: domain Description: AbiEi_3_N Location: 33442-33703 bp Feature: domain Description: AbiEi_3_N Location: 33442-33703 bp Feature: domain Description: AbiEi_3 Location: 33715-34171 bp Feature: domain Description: AbiEi_3 Location: 3371 5-341 71 bp Feature: gene Location: 34199-35119 bp Feature: domain Description: AbiEii Location: 34241-34982 bp Feature: domain Description: AbiEii Location: 34241 -34982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: JACUWD010000094.1 (2344 bp)
Overview 1 RT 1: 2-2227 bp Neighborhood of RT #1 [2, 2262] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 2-145 bp Feature: gene Location: 595-2262 bp Feature: domain Description: RVT_N Location: 643-880 bp Feature: domain Description: RVT_N Location: 643-880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931-1573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931-1573 bp Feature: domain Description: GIIM Note: maturase Location: 1624-1858 bp Feature: domain Description: GIIM Note: maturase Location: 162 4-1858 bp Feature: domain Description: HNHc Note: nucleases Location: 2068-2227 bp Feature: domain Description: HNHc Note: nucleases Location: 2 068-2 2 2 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)