myRT

myRT report for GCA_014494155.1_ASM1449415v1

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Seq: JACUVX010000009.1 (183832 bp)
Overview 1 RT 1: 130758-134641 bp Neighborhood of RT #1 [130758, 134646] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 130758-131474 bp Feature: domain Description: rph Location: 130761-131469 bp Feature: domain Description: rph Location: 1 30761 -1 31 469 bp Feature: gene Location: 131526-132182 bp Feature: domain Description: pyrE Location: 131544-132177 bp Feature: domain Description: pyrE Location: 1 31 544-1 321 77 bp Feature: gene Location: 132480-133439 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132615-133164 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 3261 5-1 331 64 bp Feature: gene Location: 133485-134081 bp Feature: domain Description: slmA Location: 133491-134067 bp Feature: domain Description: slmA Location: 1 33491 -1 34067 bp Feature: gene Location: 134188-134646 bp Feature: domain Description: dut Location: 134194-134641 bp Feature: domain Description: dut Location: 1 341 94-1 34641 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: JACUVX010000008.1 (184218 bp)
Overview 1 RT 1: 115-2875 bp Neighborhood of RT #1 [115, 2880] RVT-UG17 SLATT_5 PRK10597 Feature: gene Location: 115-252 bp Feature: gene Location: 268-402 bp Feature: gene Location: 510-1880 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 738-1344 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 738-1344 bp Feature: gene Location: 1858-2409 bp Feature: domain Description: SLATT_5 Location: 1864-2380 bp Feature: domain Description: SLATT_5 Location: 1864-2 380 bp Feature: gene Location: 2632-2880 bp Feature: domain Description: PRK10597 Location: 2635-2875 bp Feature: domain Description: PRK10597 Location: 2 635-2 875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160), PRK10597 (DNA damage-inducible protein I; Provisional)

Seq: JACUVX010000038.1 (21008 bp)
Overview 1 RT 1: 10044-14739 bp Neighborhood of RT #1 [10044, 14739] PRK10276 RVT-GII Intron_maturas2 HNHc PRK13704 Feature: gene Location: 10044-10463 bp Feature: domain Description: PRK10276 Location: 10083-10449 bp Feature: domain Description: PRK10276 Location: 10083 -10449 bp Feature: gene Location: 10477-10686 bp Feature: gene Location: 10821-12722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11088-11919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11088-11919 bp Feature: domain Description: Intron_maturas2 Location: 12033-12291 bp Feature: domain Description: Intron_maturas2 Location: 1203 3 -12291 bp Feature: domain Description: HNHc Note: nucleases Location: 12465-12627 bp Feature: domain Description: HNHc Note: nucleases Location: 12465-12627 bp Feature: gene Location: 12950-14146 bp Feature: domain Description: PRK13704 Location: 13793-14138 bp Feature: domain Description: PRK13 704 Location: 13 793 -1413 8 bp Feature: gene Location: 14143-14739 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13704 (plasmid SOS inhibition protein A; Provisional)