myRT

myRT report for GCA_014494185.1_ASM1449418v1

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Seq: JACUVW010000007.1 (165884 bp)
Overview 1 RT 1: 137374-143405 bp Neighborhood of RT #1 [137374, 143405] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 137374-138294 bp Feature: domain Description: AbiEii Location: 137416-138157 bp Feature: domain Description: AbiEii Location: 1 3741 6-1 381 57 bp Feature: gene Location: 138281-139084 bp Feature: domain Description: AbiEi_3_N Location: 138314-138575 bp Feature: domain Description: AbiEi_3_N Location: 1 3831 4-1 38575 bp Feature: domain Description: AbiEi_3 Location: 138587-139043 bp Feature: domain Description: AbiEi_3 Location: 1 38587-1 39043 bp Feature: gene Location: 139379-142588 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 139907-140396 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 39907-1 40396 bp Feature: domain Description: nitrilase Location: 141902-142499 bp Feature: domain Description: nitrilase Location: 1 41 902-1 42499 bp Feature: gene Location: 142749-142889 bp Feature: domain Description: Phage_ASH Location: 142776-142869 bp Feature: domain Description: Phage_ASH Location: 1 42776-1 42869 bp Feature: gene Location: 142935-143405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: JACUVW010000005.1 (193265 bp)
Overview 1 RT 1: 188506-193264 bp Neighborhood of RT #1 [188506, 193264] prfC PRK10597 RVT-Retrons TIR_2 Feature: gene Location: 188506-190092 bp Feature: domain Description: prfC Location: 188524-190090 bp Feature: domain Description: prfC Location: 18852 4-190090 bp Feature: gene Location: 190312-190572 bp Feature: domain Description: PRK10597 Location: 190315-190555 bp Feature: domain Description: PRK10597 Location: 190315-190555 bp Feature: gene Location: 190932-192536 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 191223-191814 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1912 2 3-191814 bp Feature: domain Description: TIR_2 Location: 192141-192429 bp Feature: domain Description: TIR_2 Location: 192 141-192 42 9 bp Feature: gene Location: 192867-193040 bp Feature: gene Location: 193121-193264 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), PRK10597 (DNA damage-inducible protein I; Provisional), RVT-Retrons, TIR_2 (pfam13676)

Seq: JACUVW010000059.1 (16267 bp)
Overview 1 RT 1: 2245-6245 bp Neighborhood of RT #1 [2245, 6253] DcuC RVT-GII Asparaginase_2 Feature: gene Location: 2245-3606 bp Feature: domain Description: DcuC Location: 2248-3580 bp Feature: domain Description: DcuC Location: 2248-3 580 bp Feature: gene Location: 3659-4030 bp Feature: gene Location: 4252-4698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4558-4660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4558-4660 bp Feature: gene Location: 4746-4895 bp Feature: gene Location: 5222-6253 bp Feature: domain Description: Asparaginase_2 Location: 5312-6245 bp Feature: domain Description: Asparaginase_2 Location: 53 12-6245 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112)

Seq: JACUVW010000051.1 (25893 bp)
Overview 1 RT 1: 11123-16021 bp Neighborhood of RT #1 [11123, 16021] PRK13704 RVT-GII Intron_maturas2 HNHc PRK10276 Feature: gene Location: 11123-11719 bp Feature: gene Location: 11716-12948 bp Feature: domain Description: PRK13704 Location: 12595-12940 bp Feature: domain Description: PRK13704 Location: 12595-1294 0 bp Feature: gene Location: 13140-15041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13407-14238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134 07-14 238 bp Feature: domain Description: Intron_maturas2 Location: 14352-14610 bp Feature: domain Description: Intron_maturas2 Location: 14 352-14 610 bp Feature: domain Description: HNHc Note: nucleases Location: 14784-14946 bp Feature: domain Description: HNHc Note: nucleases Location: 14 784 -14 94 6 bp Feature: gene Location: 15399-15818 bp Feature: domain Description: PRK10276 Location: 15438-15804 bp Feature: domain Description: PRK10276 Location: 154 38-15804 bp Feature: gene Location: 15854-16021 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13704 (plasmid SOS inhibition protein A; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: JACUVW010000092.1 (2206 bp)
Overview 1 RT 1: 93-2203 bp Neighborhood of RT #1 [93, 2203] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: gene Location: 1910-2203 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)