myRT

myRT report for GCA_014494255.1_ASM1449425v1

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Seq: JACUVT010000021.1 (90838 bp)
Overview 1 RT 1: 71777-74642 bp Neighborhood of RT #1 [71777, 74642] Phage_holin_2_1 endolysin_R21_like RVT-UG17 SLATT_5 Feature: gene Location: 71777-72055 bp Feature: domain Description: Phage_holin_2_1 Location: 71855-72041 bp Feature: domain Description: Phage_holin_2_1 Location: 71 855-72041 bp Feature: gene Location: 72055-72471 bp Feature: domain Description: endolysin_R21_like Location: 72151-72388 bp Feature: domain Description: endolysin_R21 _like Location: 721 51 -72388 bp Feature: gene Location: 72526-73896 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 72754-73360 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 72754-73360 bp Feature: gene Location: 73874-74425 bp Feature: domain Description: SLATT_5 Location: 73880-74396 bp Feature: domain Description: SLATT_5 Location: 73880-74396 bp Feature: gene Location: 74463-74642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_2_1 (pfam04971), endolysin_R21_like, RVT-UG17, SLATT_5 (pfam18160)

Seq: JACUVT010000066.1 (5108 bp)
Overview 1 RT 1: 83-2608 bp Neighborhood of RT #1 [83, 2608] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 83-1750 bp Feature: domain Description: RVT_N Location: 131-368 bp Feature: domain Description: RVT_N Location: 131-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 419-1061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 419-1061 bp Feature: domain Description: GIIM Note: maturase Location: 1112-1346 bp Feature: domain Description: GIIM Note: maturase Location: 1112 -1346 bp Feature: domain Description: HNHc Note: nucleases Location: 1556-1715 bp Feature: domain Description: HNHc Note: nucleases Location: 1556-1715 bp Feature: gene Location: 2030-2212 bp Feature: gene Location: 2324-2608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JACUVT010000026.1 (74886 bp)
Overview 1 RT 1: 49187-53070 bp Neighborhood of RT #1 [49187, 53075] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 49187-49645 bp Feature: domain Description: dut Location: 49193-49640 bp Feature: domain Description: dut Location: 49193 -49640 bp Feature: gene Location: 49752-50348 bp Feature: domain Description: slmA Location: 49758-50334 bp Feature: domain Description: slmA Location: 49758-503 3 4 bp Feature: gene Location: 50394-51353 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50529-51078 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50529-51078 bp Feature: gene Location: 51651-52307 bp Feature: domain Description: pyrE Location: 51669-52302 bp Feature: domain Description: pyrE Location: 51669-523 02 bp Feature: gene Location: 52359-53075 bp Feature: domain Description: rph Location: 52362-53070 bp Feature: domain Description: rph Location: 523 62-53 070 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)