myRT

myRT report for GCA_014494295.1_ASM1449429v1

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Seq: JACUZG010000009.1 (183831 bp)
Overview 1 RT 1: 49187-53070 bp Neighborhood of RT #1 [49187, 53075] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 49187-49645 bp Feature: domain Description: dut Location: 49193-49640 bp Feature: domain Description: dut Location: 491 93-49640 bp Feature: gene Location: 49752-50348 bp Feature: domain Description: slmA Location: 49758-50334 bp Feature: domain Description: slmA Location: 49758-50334 bp Feature: gene Location: 50394-51353 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50529-51078 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50529-51 078 bp Feature: gene Location: 51651-52307 bp Feature: domain Description: pyrE Location: 51669-52302 bp Feature: domain Description: pyrE Location: 51 669-52302 bp Feature: gene Location: 52359-53075 bp Feature: domain Description: rph Location: 52362-53070 bp Feature: domain Description: rph Location: 52362-53070 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: JACUZG010000077.1 (2692 bp)
Overview 1 RT 1: 99-2565 bp Neighborhood of RT #1 [99, 2600] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 99-359 bp Feature: gene Location: 471-653 bp Feature: gene Location: 933-2600 bp Feature: domain Description: RVT_N Location: 981-1218 bp Feature: domain Description: RVT_N Location: 981-12 18 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1269-1911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 69-1911 bp Feature: domain Description: GIIM Note: maturase Location: 1962-2196 bp Feature: domain Description: GIIM Note: maturase Location: 1962 -2 196 bp Feature: domain Description: HNHc Note: nucleases Location: 2406-2565 bp Feature: domain Description: HNHc Note: nucleases Location: 2 406-2 565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JACUZG010000008.1 (188503 bp)
Overview 1 RT 1: 181657-187621 bp Neighborhood of RT #1 [181657, 187848] SLATT_5 RVT-UG17 phage_tail_N 7tmA_amine_R-like Peptidase_S74 Feature: gene Location: 181657-181797 bp Feature: gene Location: 181810-182361 bp Feature: domain Description: SLATT_5 Location: 181816-182332 bp Feature: domain Description: SLATT_5 Location: 181816-1823 3 2 bp Feature: gene Location: 182339-183709 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 182567-183173 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 182567-183 173 bp Feature: gene Location: 183790-184122 bp Feature: gene Location: 184147-187848 bp Feature: domain Description: phage_tail_N Location: 184150-184549 bp Feature: domain Description: phage_tail_N Location: 184150-184549 bp Feature: domain Description: 7tmA_amine_R-like Location: 184966-186160 bp Feature: domain Description: 7tmA_amine_R-like Location: 184966-186160 bp Feature: domain Description: Peptidase_S74 Location: 187474-187621 bp Feature: domain Description: Peptidase_S74 Location: 187474-187621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, phage_tail_N (pfam08400), 7tmA_amine_R-like (cd14967), Peptidase_S74 (pfam13884)