myRT

myRT report for GCA_014494375.1_ASM1449437v1

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Seq: JACUZD010000026.1 Escherichia coli strain FF2219 26, whole genome shotgun sequence (43420 bp)
Overview 1 RT 1: 40780-43418 bp Neighborhood of RT #1 [40780, 43418] ParE_toxin RVT-GII Feature: gene Location: 40780-40947 bp Feature: gene Location: 41073-41276 bp Feature: domain Description: ParE_toxin Location: 41088-41271 bp Feature: domain Description: ParE_toxin Location: 41 088-41 271 bp Feature: gene Location: 41527-42942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41812-42499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 81 2-42499 bp Feature: gene Location: 42953-43225 bp Feature: gene Location: 43275-43418 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE_toxin (pfam05016), RVT-GII

Seq: JACUZD010000006.1 Escherichia coli strain FF2219 6, whole genome shotgun sequence (208689 bp)
Overview 1 RT 1: 47639-51521 bp Neighborhood of RT #1 [47639, 51526] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 47639-48097 bp Feature: domain Description: dut Location: 47645-48092 bp Feature: domain Description: dut Location: 47645-48092 bp Feature: gene Location: 48204-48800 bp Feature: domain Description: slmA Location: 48210-48786 bp Feature: domain Description: slmA Location: 482 10-48786 bp Feature: gene Location: 48846-49805 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48981-49530 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48981-49530 bp Feature: gene Location: 50103-50759 bp Feature: domain Description: pyrE Location: 50121-50754 bp Feature: domain Description: pyrE Location: 5012 1-50754 bp Feature: gene Location: 50810-51526 bp Feature: domain Description: rph Location: 50813-51521 bp Feature: domain Description: rph Location: 50813-5152 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: JACUZD010000008.1 Escherichia coli strain FF2219 8, whole genome shotgun sequence (200596 bp)
Overview 1 RT 1: 24298-28589 bp Neighborhood of RT #1 [24298, 28589] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 24298-25560 bp Feature: domain Description: YesM Location: 24811-25552 bp Feature: domain Description: YesM Location: 24811-25552 bp Feature: gene Location: 25590-25760 bp Feature: gene Location: 26110-26631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26116-26398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26116-263 98 bp Feature: domain Description: GIIM Note: maturase Location: 26446-26626 bp Feature: domain Description: GIIM Note: maturase Location: 26446-26626 bp Feature: gene Location: 26659-27198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26989-27067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26989-27067 bp Feature: gene Location: 27229-27426 bp Feature: gene Location: 27684-28589 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)