myRT

myRT report for GCA_014494385.1_ASM1449438v1

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Seq: JACUZC010000026.1 Escherichia coli strain FF2156 26, whole genome shotgun sequence (43420 bp)
Overview 1 RT 1: 196-2641 bp Neighborhood of RT #1 [196, 2641] RVT-GII ParE_toxin Feature: gene Location: 196-468 bp Feature: gene Location: 479-1894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764-1451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764-1 451 bp Feature: gene Location: 2145-2348 bp Feature: domain Description: ParE_toxin Location: 2160-2343 bp Feature: domain Description: ParE_toxin Location: 21 60-2343 bp Feature: gene Location: 2474-2641 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, ParE_toxin (pfam05016)

Seq: JACUZC010000007.1 Escherichia coli strain FF2156 7, whole genome shotgun sequence (200596 bp)
Overview 1 RT 1: 172008-176291 bp Neighborhood of RT #1 [172008, 176299] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 172008-172913 bp Feature: gene Location: 173051-173242 bp Feature: gene Location: 173399-173938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173729-173807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17372 9-173807 bp Feature: gene Location: 173966-174487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173972-174254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173972 -1742 54 bp Feature: domain Description: GIIM Note: maturase Location: 174302-174482 bp Feature: domain Description: GIIM Note: maturase Location: 174302 -174482 bp Feature: gene Location: 174809-174997 bp Feature: gene Location: 175037-176299 bp Feature: domain Description: YesM Location: 175550-176291 bp Feature: domain Description: YesM Location: 175550-1762 91 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: JACUZC010000008.1 Escherichia coli strain FF2156 8, whole genome shotgun sequence (196676 bp)
Overview 1 RT 1: 35626-39508 bp Neighborhood of RT #1 [35626, 39513] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 35626-36084 bp Feature: domain Description: dut Location: 35632-36079 bp Feature: domain Description: dut Location: 3 563 2-3 6079 bp Feature: gene Location: 36191-36787 bp Feature: domain Description: slmA Location: 36197-36773 bp Feature: domain Description: slmA Location: 3 6197-3 6773 bp Feature: gene Location: 36833-37792 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36968-37517 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 6968-3 7517 bp Feature: gene Location: 38090-38746 bp Feature: domain Description: pyrE Location: 38108-38741 bp Feature: domain Description: pyrE Location: 3 8108-3 8741 bp Feature: gene Location: 38797-39513 bp Feature: domain Description: rph Location: 38800-39508 bp Feature: domain Description: rph Location: 3 8800-3 9508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)