myRT

myRT report for GCA_014494455.1_ASM1449445v1

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Seq: JACUYY010000023.1 Escherichia coli strain FF1371 23, whole genome shotgun sequence (62631 bp)
Overview 1 RT 1: 32930-37213 bp Neighborhood of RT #1 [32930, 37221] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 32930-33835 bp Feature: gene Location: 33973-34164 bp Feature: gene Location: 34321-34860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34651-34729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34651 -34729 bp Feature: gene Location: 34888-35409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34894-35176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34894-351 76 bp Feature: domain Description: GIIM Note: maturase Location: 35224-35404 bp Feature: domain Description: GIIM Note: maturase Location: 35224-35404 bp Feature: gene Location: 35731-35919 bp Feature: gene Location: 35959-37221 bp Feature: domain Description: YesM Location: 36472-37213 bp Feature: domain Description: YesM Location: 36472-3721 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: JACUYY010000004.1 Escherichia coli strain FF1371 4, whole genome shotgun sequence (207405 bp)
Overview 1 RT 1: 46937-50819 bp Neighborhood of RT #1 [46937, 50824] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 46937-47395 bp Feature: domain Description: dut Location: 46943-47390 bp Feature: domain Description: dut Location: 46943-47390 bp Feature: gene Location: 47502-48098 bp Feature: domain Description: slmA Location: 47508-48084 bp Feature: domain Description: slmA Location: 47508-48084 bp Feature: gene Location: 48144-49103 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48279-48828 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 482 79-4882 8 bp Feature: gene Location: 49401-50057 bp Feature: domain Description: pyrE Location: 49419-50052 bp Feature: domain Description: pyrE Location: 49419-50052 bp Feature: gene Location: 50108-50824 bp Feature: domain Description: rph Location: 50111-50819 bp Feature: domain Description: rph Location: 50111-50819 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)