myRT

myRT report for GCA_014494525.1_ASM1449452v1

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Seq: JACUYX010000077.1 (2663 bp)
Overview 1 RT 1: 270-2420 bp Neighborhood of RT #1 [270, 2515] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 270-479 bp Feature: gene Location: 614-2515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 881-1712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 881 -1 71 2 bp Feature: domain Description: Intron_maturas2 Location: 1826-2084 bp Feature: domain Description: Intron_maturas2 Location: 1 826-2084 bp Feature: domain Description: HNHc Note: nucleases Location: 2258-2420 bp Feature: domain Description: HNHc Note: nucleases Location: 2258-2420 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: JACUYX010000025.1 (69756 bp)
Overview 1 RT 1: 30094-36181 bp Neighborhood of RT #1 [30094, 36181] Psu PRK09678 RVT-UG8 RVT-UG3 PRK09692 Feature: gene Location: 30094-30648 bp Feature: domain Description: Psu Location: 30118-30628 bp Feature: domain Description: Psu Location: 30118-3062 8 bp Feature: gene Location: 30650-30922 bp Feature: domain Description: PRK09678 Location: 30659-30827 bp Feature: domain Description: PRK09678 Location: 30659-3082 7 bp Feature: gene Location: 31371-33374 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 31866-32313 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 31866-32 313 bp Feature: gene Location: 33378-34574 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 33663-34125 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 33663-3412 5 bp Feature: gene Location: 34576-35754 bp Feature: domain Description: PRK09692 Location: 34582-35740 bp Feature: domain Description: PRK09692 Location: 34582 -35740 bp Feature: gene Location: 36029-36181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG8, RVT-UG3, PRK09692 (Integrase; provisional)