myRT

myRT report for GCA_014494575.1_ASM1449457v1

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Seq: JACUYT010000024.1 Escherichia coli strain BP14015 24, whole genome shotgun sequence (81896 bp)
Overview 1 RT 1: 42190-46072 bp Neighborhood of RT #1 [42190, 46077] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 42190-42906 bp Feature: domain Description: rph Location: 42193-42901 bp Feature: domain Description: rph Location: 421 93-42901 bp Feature: gene Location: 42957-43613 bp Feature: domain Description: pyrE Location: 42975-43608 bp Feature: domain Description: pyrE Location: 42975-43608 bp Feature: gene Location: 43911-44870 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 44046-44595 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 44046-44595 bp Feature: gene Location: 44916-45512 bp Feature: domain Description: slmA Location: 44922-45498 bp Feature: domain Description: slmA Location: 44922-45498 bp Feature: gene Location: 45619-46077 bp Feature: domain Description: dut Location: 45625-46072 bp Feature: domain Description: dut Location: 45625-46072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: JACUYT010000003.1 Escherichia coli strain BP14015 3, whole genome shotgun sequence (231244 bp)
Overview 1 RT 1: 42079-46370 bp Neighborhood of RT #1 [42079, 46370] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 42079-43341 bp Feature: domain Description: YesM Location: 42592-43333 bp Feature: domain Description: YesM Location: 42 592 -43333 bp Feature: gene Location: 43371-43541 bp Feature: gene Location: 43891-44412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43897-44179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43897-44179 bp Feature: domain Description: GIIM Note: maturase Location: 44227-44407 bp Feature: domain Description: GIIM Note: maturase Location: 442 2 7-44407 bp Feature: gene Location: 44440-44979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44770-44848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44770-44848 bp Feature: gene Location: 45010-45207 bp Feature: gene Location: 45465-46370 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)