myRT

myRT report for GCA_014494645.1_ASM1449464v1

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Seq: JACUYO010000107.1 Escherichia coli strain BA9666 107, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1 662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1 737-1 935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACUYO010000033.1 Escherichia coli strain BA9666 33, whole genome shotgun sequence (54384 bp)
Overview 1 RT 1: 24214-28505 bp Neighborhood of RT #1 [24214, 28505] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 24214-25476 bp Feature: domain Description: YesM Location: 24727-25468 bp Feature: domain Description: YesM Location: 2 472 7-2 5468 bp Feature: gene Location: 25506-25676 bp Feature: gene Location: 26026-26547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26032-26314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6032 -2 6314 bp Feature: domain Description: GIIM Note: maturase Location: 26362-26542 bp Feature: domain Description: GIIM Note: maturase Location: 2 6362 -2 6542 bp Feature: gene Location: 26575-27114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26905-26983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6905-2 6983 bp Feature: gene Location: 27145-27342 bp Feature: gene Location: 27600-28505 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: JACUYO010000004.1 Escherichia coli strain BA9666 4, whole genome shotgun sequence (162801 bp)
Overview 1 RT 1: 28821-35064 bp Neighborhood of RT #1 [28821, 35201] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 28821-29087 bp Feature: domain Description: Phage_integrase Location: 28887-28983 bp Feature: domain Description: Phage_integrase Location: 28887-28983 bp Feature: gene Location: 29170-29640 bp Feature: gene Location: 29987-33196 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30515-31004 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3 0515-3 1004 bp Feature: domain Description: nitrilase Location: 32510-33107 bp Feature: domain Description: nitrilase Location: 3 2510-3 3 107 bp Feature: gene Location: 33491-34294 bp Feature: domain Description: AbiEi_3_N Location: 33524-33785 bp Feature: domain Description: AbiEi_3 _N Location: 3 3 524-3 3 785 bp Feature: domain Description: AbiEi_3 Location: 33797-34253 bp Feature: domain Description: AbiEi_3 Location: 3 3 797-3 4253 bp Feature: gene Location: 34281-35201 bp Feature: domain Description: AbiEii Location: 34323-35064 bp Feature: domain Description: AbiEii Location: 3 43 23 -3 5064 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)