myRT

myRT report for GCA_014494735.1_ASM1449473v1

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Seq: JACUYK010000028.1 Escherichia coli strain BA8689 28, whole genome shotgun sequence (54101 bp)
Overview 1 RT 1: 33335-36685 bp Neighborhood of RT #1 [33335, 36717] PinE RVT-GII GIIM PRK09413 Feature: gene Location: 33335-33982 bp Feature: domain Description: PinE Location: 33428-33977 bp Feature: domain Description: PinE Location: 33428-33977 bp Feature: gene Location: 34082-34483 bp Feature: gene Location: 34692-36044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35013-35631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3501 3-35631 bp Feature: domain Description: GIIM Note: maturase Location: 35679-35910 bp Feature: domain Description: GIIM Note: maturase Location: 35679-3591 0 bp Feature: gene Location: 36115-36465 bp Feature: gene Location: 36520-36717 bp Feature: domain Description: PRK09413 Location: 36523-36685 bp Feature: domain Description: PRK0941 3 Location: 36523-36685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, GIIM (pfam08388), PRK09413 (IS2 repressor TnpA; Reviewed)

Seq: JACUYK010000005.1 Escherichia coli strain BA8689 5, whole genome shotgun sequence (241643 bp)
Overview 1 RT 1: 155657-159948 bp Neighborhood of RT #1 [155657, 159948] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 155657-156919 bp Feature: domain Description: YesM Location: 156170-156911 bp Feature: domain Description: YesM Location: 156170-156911 bp Feature: gene Location: 156949-157119 bp Feature: gene Location: 157469-157990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 157475-157757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 157475-157757 bp Feature: domain Description: GIIM Note: maturase Location: 157805-157985 bp Feature: domain Description: GIIM Note: maturase Location: 157805-157985 bp Feature: gene Location: 158018-158557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 158348-158426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 158348-15842 6 bp Feature: gene Location: 158588-158785 bp Feature: gene Location: 159043-159948 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: JACUYK010000056.1 Escherichia coli strain BA8689 56, whole genome shotgun sequence (16490 bp)
Overview 1 RT 1: 8807-11721 bp Neighborhood of RT #1 [8807, 11786] RVT-GII GIIM PHA02517 Feature: gene Location: 8807-8950 bp Feature: gene Location: 8975-9178 bp Feature: gene Location: 9246-10769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9519-10251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9519-10251 bp Feature: domain Description: GIIM Note: maturase Location: 10326-10524 bp Feature: domain Description: GIIM Note: maturase Location: 103 26-10524 bp Feature: gene Location: 10723-11148 bp Feature: gene Location: 11361-11786 bp Feature: domain Description: PHA02517 Location: 11385-11721 bp Feature: domain Description: PHA02517 Location: 113 85-11721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JACUYK010000009.1 Escherichia coli strain BA8689 9, whole genome shotgun sequence (165905 bp)
Overview 1 RT 1: 137395-143426 bp Neighborhood of RT #1 [137395, 143426] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 137395-138315 bp Feature: domain Description: AbiEii Location: 137437-138178 bp Feature: domain Description: AbiEii Location: 1374 37-138178 bp Feature: gene Location: 138302-139105 bp Feature: domain Description: AbiEi_3_N Location: 138335-138596 bp Feature: domain Description: AbiEi_3_N Location: 138335-138596 bp Feature: domain Description: AbiEi_3 Location: 138608-139064 bp Feature: domain Description: AbiEi_3 Location: 138608-139064 bp Feature: gene Location: 139400-142609 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 139928-140417 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 139928-14 04 17 bp Feature: domain Description: nitrilase Location: 141923-142520 bp Feature: domain Description: nitrilase Location: 14 1923-14 2520 bp Feature: gene Location: 142770-142910 bp Feature: domain Description: Phage_ASH Location: 142797-142890 bp Feature: domain Description: Phage_ASH Location: 14 2797-14 2890 bp Feature: gene Location: 142956-143426 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)