myRT

myRT report for GCA_014494775.1_ASM1449477v1

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Seq: JACUYJ010000021.1 Escherichia coli strain BA8153 21, whole genome shotgun sequence (89913 bp)
Overview 1 RT 1: 36445-39967 bp Neighborhood of RT #1 [36445, 39967] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 36445-36867 bp Feature: domain Description: DUF1380 Location: 36448-36742 bp Feature: domain Description: DUF1 380 Location: 36448-36742 bp Feature: gene Location: 36919-37221 bp Feature: gene Location: 37334-39001 bp Feature: domain Description: RVT_N Location: 37382-37619 bp Feature: domain Description: RVT_N Location: 37382-3761 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37670-38312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37670-3831 2 bp Feature: domain Description: GIIM Note: maturase Location: 38363-38597 bp Feature: domain Description: GIIM Note: maturase Location: 38363-38597 bp Feature: domain Description: HNHc Note: nucleases Location: 38807-38966 bp Feature: domain Description: HNHc Note: nucleases Location: 38807-38966 bp Feature: gene Location: 39281-39463 bp Feature: gene Location: 39575-39967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JACUYJ010000032.1 Escherichia coli strain BA8153 32, whole genome shotgun sequence (54357 bp)
Overview 1 RT 1: 25880-30163 bp Neighborhood of RT #1 [25880, 30171] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 25880-26785 bp Feature: gene Location: 27043-27240 bp Feature: gene Location: 27271-27810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27601-27679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 7601-2 7679 bp Feature: gene Location: 27838-28359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27844-28126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 7844-2 812 6 bp Feature: domain Description: GIIM Note: maturase Location: 28174-28354 bp Feature: domain Description: GIIM Note: maturase Location: 2 8174-2 8354 bp Feature: gene Location: 28681-28869 bp Feature: gene Location: 28909-30171 bp Feature: domain Description: YesM Location: 29422-30163 bp Feature: domain Description: YesM Location: 2 942 2 -30163 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: JACUYJ010000007.1 Escherichia coli strain BA8153 7, whole genome shotgun sequence (162743 bp)
Overview 1 RT 1: 28763-35006 bp Neighborhood of RT #1 [28763, 35143] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 28763-29029 bp Feature: domain Description: Phage_integrase Location: 28829-28925 bp Feature: domain Description: Phage_integrase Location: 28829-28925 bp Feature: gene Location: 29112-29582 bp Feature: gene Location: 29929-33138 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30457-30946 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3 0457-3 0946 bp Feature: domain Description: nitrilase Location: 32452-33049 bp Feature: domain Description: nitrilase Location: 3 2452-3 3 049 bp Feature: gene Location: 33433-34236 bp Feature: domain Description: AbiEi_3_N Location: 33466-33727 bp Feature: domain Description: AbiEi_3 _N Location: 3 3 466-3 3 727 bp Feature: domain Description: AbiEi_3 Location: 33739-34195 bp Feature: domain Description: AbiEi_3 Location: 3 3 73 9-3 4195 bp Feature: gene Location: 34223-35143 bp Feature: domain Description: AbiEii Location: 34265-35006 bp Feature: domain Description: AbiEii Location: 3 4265-3 5006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: JACUYJ010000096.1 Escherichia coli strain BA8153 96, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)