myRT

myRT report for GCA_014494805.1_ASM1449480v1

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Seq: JACUYI010000004.1 (248783 bp)
Overview 1 RT 1: 209121-215208 bp Neighborhood of RT #1 [209121, 215208] Psu PRK09678 RVT-UG8 RVT-UG3 PRK09692 Feature: gene Location: 209121-209675 bp Feature: domain Description: Psu Location: 209145-209655 bp Feature: domain Description: Psu Location: 2091 45-209655 bp Feature: gene Location: 209677-209949 bp Feature: domain Description: PRK09678 Location: 209686-209854 bp Feature: domain Description: PRK09678 Location: 209686-209854 bp Feature: gene Location: 210398-212401 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 210893-211340 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 21 0893-21 1 340 bp Feature: gene Location: 212405-213601 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 212690-213152 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 21 2690-21 31 52 bp Feature: gene Location: 213603-214781 bp Feature: domain Description: PRK09692 Location: 213609-214767 bp Feature: domain Description: PRK09692 Location: 21 3609-21 4767 bp Feature: gene Location: 215056-215208 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG8, RVT-UG3, PRK09692 (Integrase; provisional)

Seq: JACUYI010000035.1 (33872 bp)
Overview 1 RT 1: 3342-7474 bp Neighborhood of RT #1 [3342, 7474] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 3342-3575 bp Feature: domain Description: DUF905 Location: 3372-3570 bp Feature: domain Description: DUF905 Location: 3372 -3570 bp Feature: gene Location: 3638-4090 bp Feature: domain Description: PRK13732 Location: 3644-4088 bp Feature: domain Description: PRK13732 Location: 3644-4088 bp Feature: gene Location: 4285-6186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4552-5383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4552 -5383 bp Feature: domain Description: Intron_maturas2 Location: 5497-5755 bp Feature: domain Description: Intron_maturas2 Location: 5497-5755 bp Feature: domain Description: HNHc Note: nucleases Location: 5929-6091 bp Feature: domain Description: HNHc Note: nucleases Location: 592 9-6091 bp Feature: gene Location: 6928-7131 bp Feature: gene Location: 7208-7474 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)