myRT

myRT report for GCA_014494965.1_ASM1449496v1

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Seq: JACUXY010000002.1 Escherichia coli strain BA29490 2, whole genome shotgun sequence (309100 bp)
Overview 1 RT 1: 800-4270 bp Neighborhood of RT #1 [800, 4377] Arm-DNA-bind_3 RVT-Retrons PRK09678 Feature: gene Location: 800-1102 bp Feature: domain Description: Arm-DNA-bind_3 Location: 809-1061 bp Feature: domain Description: Arm-DNA-bind_3 Location: 809-1 061 bp Feature: gene Location: 1286-1531 bp Feature: gene Location: 1557-2489 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1659-2253 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 659-2253 bp Feature: gene Location: 2491-3477 bp Feature: gene Location: 4105-4377 bp Feature: domain Description: PRK09678 Location: 4114-4270 bp Feature: domain Description: PRK09678 Location: 41 1 4-4270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: JACUXY010000031.1 Escherichia coli strain BA29490 31, whole genome shotgun sequence (43564 bp)
Overview 1 RT 1: 15307-19590 bp Neighborhood of RT #1 [15307, 19598] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 15307-16212 bp Feature: gene Location: 16350-16541 bp Feature: gene Location: 16698-17237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17028-17106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1702 8-17106 bp Feature: gene Location: 17265-17786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17271-17553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172 71-17553 bp Feature: domain Description: GIIM Note: maturase Location: 17601-17781 bp Feature: domain Description: GIIM Note: maturase Location: 17601-17781 bp Feature: gene Location: 18108-18296 bp Feature: gene Location: 18336-19598 bp Feature: domain Description: YesM Location: 18849-19590 bp Feature: domain Description: YesM Location: 18849-19590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: JACUXY010000082.1 Escherichia coli strain BA29490 82, whole genome shotgun sequence (2206 bp)
Overview 1 RT 1: 1-1869 bp Neighborhood of RT #1 [1, 2114] RVT-GII GIIM Feature: gene Location: 1-297 bp Feature: gene Location: 591-2114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 864-1596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 864-1596 bp Feature: domain Description: GIIM Note: maturase Location: 1671-1869 bp Feature: domain Description: GIIM Note: maturase Location: 1671-1869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)