myRT

myRT report for GCA_014495025.1_ASM1449502v1

Download annotations/find similar RTs

Seq: JACUXW010000031.1 Escherichia coli strain BA28453 31, whole genome shotgun sequence (66794 bp)
Overview 1 RT 1: 1814-8057 bp Neighborhood of RT #1 [1814, 8194] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 1814-2080 bp Feature: domain Description: Phage_integrase Location: 1880-1976 bp Feature: domain Description: Phage_integrase Location: 1 880-1 976 bp Feature: gene Location: 2163-2633 bp Feature: gene Location: 2980-6189 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3508-3997 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3508-3997 bp Feature: domain Description: nitrilase Location: 5503-6100 bp Feature: domain Description: nitrilase Location: 5503-61 00 bp Feature: gene Location: 6484-7287 bp Feature: domain Description: AbiEi_3_N Location: 6517-6778 bp Feature: domain Description: AbiEi_3_N Location: 651 7-6778 bp Feature: domain Description: AbiEi_3 Location: 6790-7246 bp Feature: domain Description: AbiEi_3 Location: 6790-7246 bp Feature: gene Location: 7274-8194 bp Feature: domain Description: AbiEii Location: 7316-8057 bp Feature: domain Description: AbiEii Location: 731 6-8057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: JACUXW010000039.1 Escherichia coli strain BA28453 39, whole genome shotgun sequence (41278 bp)
Overview 1 RT 1: 5557-9848 bp Neighborhood of RT #1 [5557, 9848] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 5557-6819 bp Feature: domain Description: YesM Location: 6070-6811 bp Feature: domain Description: YesM Location: 6070-6811 bp Feature: gene Location: 6849-7019 bp Feature: gene Location: 7369-7890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7375-7657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7375-7657 bp Feature: domain Description: GIIM Note: maturase Location: 7705-7885 bp Feature: domain Description: GIIM Note: maturase Location: 7705-7885 bp Feature: gene Location: 7918-8457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8248-8326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 48-832 6 bp Feature: gene Location: 8488-8685 bp Feature: gene Location: 8943-9848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: JACUXW010000057.1 Escherichia coli strain BA28453 57, whole genome shotgun sequence (24681 bp)
Overview 1 RT 1: 1640-5776 bp Neighborhood of RT #1 [1640, 5776] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1640-1873 bp Feature: domain Description: DUF905 Location: 1670-1868 bp Feature: domain Description: DUF905 Location: 1670-1868 bp Feature: gene Location: 1941-2393 bp Feature: domain Description: PRK13732 Location: 1947-2391 bp Feature: domain Description: PRK13 73 2 Location: 1947-23 91 bp Feature: gene Location: 2588-4489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2855-3686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2855-3 686 bp Feature: domain Description: Intron_maturas2 Location: 3800-4058 bp Feature: domain Description: Intron_maturas2 Location: 3 800-4058 bp Feature: domain Description: HNHc Note: nucleases Location: 4232-4394 bp Feature: domain Description: HNHc Note: nucleases Location: 423 2-43 94 bp Feature: gene Location: 5231-5434 bp Feature: gene Location: 5486-5776 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)