myRT

myRT report for GCA_014495055.1_ASM1449505v1

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Seq: JACUXU010000013.1 Escherichia coli strain BA26818 13, whole genome shotgun sequence (116331 bp)
Overview 1 RT 1: 24266-27321 bp Neighborhood of RT #1 [24266, 27321] RVT-GII RVT-GII GIIM Feature: gene Location: 24266-25171 bp Feature: gene Location: 25309-25500 bp Feature: gene Location: 25657-26196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25987-26065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25987-26065 bp Feature: gene Location: 26224-26745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26230-26512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26230-2651 2 bp Feature: domain Description: GIIM Note: maturase Location: 26560-26740 bp Feature: domain Description: GIIM Note: maturase Location: 26560-26740 bp Feature: gene Location: 26844-27023 bp Feature: gene Location: 27133-27321 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACUXU010000007.1 Escherichia coli strain BA26818 7, whole genome shotgun sequence (197101 bp)
Overview 1 RT 1: 36051-39933 bp Neighborhood of RT #1 [36051, 39938] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 36051-36509 bp Feature: domain Description: dut Location: 36057-36504 bp Feature: domain Description: dut Location: 36057-36504 bp Feature: gene Location: 36616-37212 bp Feature: domain Description: slmA Location: 36622-37198 bp Feature: domain Description: slmA Location: 3662 2 -37198 bp Feature: gene Location: 37258-38217 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 37393-37942 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 37393-37942 bp Feature: gene Location: 38515-39171 bp Feature: domain Description: pyrE Location: 38533-39166 bp Feature: domain Description: pyrE Location: 38533-39166 bp Feature: gene Location: 39222-39938 bp Feature: domain Description: rph Location: 39225-39933 bp Feature: domain Description: rph Location: 392 2 5-39933 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: JACUXU010000080.1 Escherichia coli strain BA26818 80, whole genome shotgun sequence (2663 bp)
Overview 1 RT 1: 149-1955 bp Neighborhood of RT #1 [149, 2050] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 149-2050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1247 bp Feature: domain Description: Intron_maturas2 Location: 1361-1619 bp Feature: domain Description: Intron_maturas2 Location: 13 61-1619 bp Feature: domain Description: HNHc Note: nucleases Location: 1793-1955 bp Feature: domain Description: HNHc Note: nucleases Location: 1793 -1955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: JACUXU010000082.1 Escherichia coli strain BA26818 82, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)