myRT

myRT report for GCA_014495075.1_ASM1449507v1

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Seq: JACUXT010000045.1 Escherichia coli strain BA26754 45, whole genome shotgun sequence (27508 bp)
Overview 1 RT 1: 798-4267 bp Neighborhood of RT #1 [798, 4374] Arm-DNA-bind_3 RVT-Retrons PRK09678 Feature: gene Location: 798-1100 bp Feature: domain Description: Arm-DNA-bind_3 Location: 807-1059 bp Feature: domain Description: Arm-DNA-bind_3 Location: 807-1 059 bp Feature: gene Location: 1284-1529 bp Feature: gene Location: 1555-2487 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1657-2251 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 657-2251 bp Feature: gene Location: 2489-3475 bp Feature: gene Location: 4102-4374 bp Feature: domain Description: PRK09678 Location: 4111-4267 bp Feature: domain Description: PRK09678 Location: 41 1 1 -4267 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: JACUXT010000081.1 Escherichia coli strain BA26754 81, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACUXT010000009.1 Escherichia coli strain BA26754 9, whole genome shotgun sequence (165462 bp)
Overview 1 RT 1: 155615-159898 bp Neighborhood of RT #1 [155615, 159906] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 155615-156520 bp Feature: gene Location: 156658-156849 bp Feature: gene Location: 157006-157545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 157336-157414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1573 3 6-157414 bp Feature: gene Location: 157573-158094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 157579-157861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 157579-157861 bp Feature: domain Description: GIIM Note: maturase Location: 157909-158089 bp Feature: domain Description: GIIM Note: maturase Location: 157909-158089 bp Feature: gene Location: 158416-158604 bp Feature: gene Location: 158644-159906 bp Feature: domain Description: YesM Location: 159157-159898 bp Feature: domain Description: YesM Location: 159157-159898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)