myRT

myRT report for GCA_014495085.1_ASM1449508v1

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Seq: JACUXV010000054.1 (24975 bp)
Overview 1 RT 1: 4-3931 bp Neighborhood of RT #1 [4, 3936] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 4-546 bp Feature: gene Location: 765-974 bp Feature: gene Location: 1109-3010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1376-2207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 376-2207 bp Feature: domain Description: Intron_maturas2 Location: 2321-2579 bp Feature: domain Description: Intron_maturas2 Location: 2321 -2579 bp Feature: domain Description: HNHc Note: nucleases Location: 2753-2915 bp Feature: domain Description: HNHc Note: nucleases Location: 2753-291 5 bp Feature: gene Location: 3205-3645 bp Feature: domain Description: PRK13732 Location: 3211-3643 bp Feature: domain Description: PRK1 3732 Location: 321 1 -3643 bp Feature: gene Location: 3703-3936 bp Feature: domain Description: DUF905 Location: 3733-3931 bp Feature: domain Description: DUF905 Location: 3733-3931 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACUXV010000035.1 (54836 bp)
Overview 1 RT 1: 2-5009 bp Neighborhood of RT #1 [2, 5011] Caudo_TAP RVT-Retrons TIR_2 PRK10597 prfC Feature: gene Location: 2-538 bp Feature: domain Description: Caudo_TAP Location: 170-527 bp Feature: domain Description: Caudo_TAP Location: 170-52 7 bp Feature: gene Location: 983-2587 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1274-1865 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 74-1865 bp Feature: domain Description: TIR_2 Location: 2192-2525 bp Feature: domain Description: TIR_2 Location: 2 192 -2 52 5 bp Feature: gene Location: 2945-3205 bp Feature: domain Description: PRK10597 Location: 2948-3188 bp Feature: domain Description: PRK10597 Location: 2 948-3188 bp Feature: gene Location: 3425-5011 bp Feature: domain Description: prfC Location: 3443-5009 bp Feature: domain Description: prfC Location: 3443-5009 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACUXV010000080.1 (2420 bp)
Overview 1 RT 1: 671-2303 bp Neighborhood of RT #1 [671, 2338] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 671-2338 bp Feature: domain Description: RVT_N Location: 719-956 bp Feature: domain Description: RVT_N Location: 719-956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1007-1649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1007-1649 bp Feature: domain Description: GIIM Note: maturase Location: 1700-1934 bp Feature: domain Description: GIIM Note: maturase Location: 1700-193 4 bp Feature: domain Description: HNHc Note: nucleases Location: 2144-2303 bp Feature: domain Description: HNHc Note: nucleases Location: 2144-23 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACUXV010000048.1 (32235 bp)
Overview 1 RT 1: 9921-15089 bp Neighborhood of RT #1 [9921, 15106] MFS_SLC46_TetA_like PHA02517 RVT-GII GIIM PHA02517 HTH_32 Feature: gene Location: 9921-11114 bp Feature: domain Description: MFS_SLC46_TetA_like Location: 10002-11082 bp Feature: domain Description: MFS_SLC4 6_TetA_like Location: 10002-11082 bp Feature: gene Location: 11607-12089 bp Feature: domain Description: PHA02517 Location: 11670-12024 bp Feature: domain Description: PHA02517 Location: 11670-12024 bp Feature: gene Location: 12681-14204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12954-13686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12954 -13686 bp Feature: domain Description: GIIM Note: maturase Location: 13761-13959 bp Feature: domain Description: GIIM Note: maturase Location: 13761-13959 bp Feature: gene Location: 14381-14767 bp Feature: domain Description: PHA02517 Location: 14384-14765 bp Feature: domain Description: PHA02517 Location: 14 384 -14 765 bp Feature: gene Location: 14807-15106 bp Feature: domain Description: HTH_32 Location: 14876-15089 bp Feature: domain Description: HTH_32 Location: 14 876-15089 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT