myRT

myRT report for GCA_014495135.1_ASM1449513v1

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Seq: JACUXP010000034.1 Escherichia coli strain BA25291_2 34, whole genome shotgun sequence (43770 bp)
Overview 1 RT 1: 15284-19567 bp Neighborhood of RT #1 [15284, 19575] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 15284-16189 bp Feature: gene Location: 16447-16644 bp Feature: gene Location: 16675-17214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17005-17083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7005-1 7083 bp Feature: gene Location: 17242-17763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17248-17530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7248-1 7530 bp Feature: domain Description: GIIM Note: maturase Location: 17578-17758 bp Feature: domain Description: GIIM Note: maturase Location: 1 7578-1 7758 bp Feature: gene Location: 18085-18273 bp Feature: gene Location: 18313-19575 bp Feature: domain Description: YesM Location: 18826-19567 bp Feature: domain Description: YesM Location: 1 8826-1 9567 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: JACUXP010000040.1 Escherichia coli strain BA25291_2 40, whole genome shotgun sequence (37681 bp)
Overview 1 RT 1: 1-2181 bp Neighborhood of RT #1 [1, 2181] RVT_N RVT-GII GIIM Feature: gene Location: 1-1323 bp Feature: domain Description: RVT_N Location: 49-286 bp Feature: domain Description: RVT_N Location: 49-2 86 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 337-979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 337-979 bp Feature: domain Description: GIIM Note: maturase Location: 1030-1264 bp Feature: domain Description: GIIM Note: maturase Location: 1030-12 64 bp Feature: gene Location: 1603-1785 bp Feature: gene Location: 1897-2181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JACUXP010000007.1 Escherichia coli strain BA25291_2 7, whole genome shotgun sequence (162743 bp)
Overview 1 RT 1: 28763-35006 bp Neighborhood of RT #1 [28763, 35143] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 28763-29029 bp Feature: domain Description: Phage_integrase Location: 28829-28925 bp Feature: domain Description: Phage_integrase Location: 28829-28925 bp Feature: gene Location: 29112-29582 bp Feature: gene Location: 29929-33138 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30457-30946 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3 0457-3 0946 bp Feature: domain Description: nitrilase Location: 32452-33049 bp Feature: domain Description: nitrilase Location: 3 2452-3 3 049 bp Feature: gene Location: 33433-34236 bp Feature: domain Description: AbiEi_3_N Location: 33466-33727 bp Feature: domain Description: AbiEi_3 _N Location: 3 3 466-3 3 727 bp Feature: domain Description: AbiEi_3 Location: 33739-34195 bp Feature: domain Description: AbiEi_3 Location: 3 3 73 9-3 4195 bp Feature: gene Location: 34223-35143 bp Feature: domain Description: AbiEii Location: 34265-35006 bp Feature: domain Description: AbiEii Location: 3 4265-3 5006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: JACUXP010000097.1 Escherichia coli strain BA25291_2 97, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)