myRT

myRT report for GCA_014495165.1_ASM1449516v1

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Seq: JACUXQ010000100.1 Escherichia coli strain BA25291 100, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1 098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 73-1 371 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACUXQ010000033.1 Escherichia coli strain BA25291 33, whole genome shotgun sequence (43770 bp)
Overview 1 RT 1: 15284-19567 bp Neighborhood of RT #1 [15284, 19575] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 15284-16189 bp Feature: gene Location: 16447-16644 bp Feature: gene Location: 16675-17214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17005-17083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17005-17083 bp Feature: gene Location: 17242-17763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17248-17530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172 48-17530 bp Feature: domain Description: GIIM Note: maturase Location: 17578-17758 bp Feature: domain Description: GIIM Note: maturase Location: 17578-17758 bp Feature: gene Location: 18085-18273 bp Feature: gene Location: 18313-19575 bp Feature: domain Description: YesM Location: 18826-19567 bp Feature: domain Description: YesM Location: 1882 6-19567 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: JACUXQ010000040.1 Escherichia coli strain BA25291 40, whole genome shotgun sequence (37746 bp)
Overview 1 RT 1: 35286-37687 bp Neighborhood of RT #1 [35286, 37743] RVT_N RVT-GII GIIM Feature: gene Location: 35286-35522 bp Feature: gene Location: 35566-35850 bp Feature: gene Location: 36424-37743 bp Feature: domain Description: RVT_N Location: 36472-36709 bp Feature: domain Description: RVT_N Location: 3 6472-3 6709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36760-37402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 6760-3 7402 bp Feature: domain Description: GIIM Note: maturase Location: 37453-37687 bp Feature: domain Description: GIIM Note: maturase Location: 3 7453 -3 7687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JACUXQ010000007.1 Escherichia coli strain BA25291 7, whole genome shotgun sequence (162743 bp)
Overview 1 RT 1: 127601-133632 bp Neighborhood of RT #1 [127601, 133632] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 127601-128521 bp Feature: domain Description: AbiEii Location: 127643-128384 bp Feature: domain Description: AbiEii Location: 12764 3-128384 bp Feature: gene Location: 128508-129311 bp Feature: domain Description: AbiEi_3_N Location: 128541-128802 bp Feature: domain Description: AbiEi_3_N Location: 12854 1-128802 bp Feature: domain Description: AbiEi_3 Location: 128814-129270 bp Feature: domain Description: AbiEi_3 Location: 128814 -129270 bp Feature: gene Location: 129606-132815 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 130134-130623 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 130134 -130623 bp Feature: domain Description: nitrilase Location: 132129-132726 bp Feature: domain Description: nitrilase Location: 132129-132726 bp Feature: gene Location: 132976-133116 bp Feature: domain Description: Phage_ASH Location: 133003-133096 bp Feature: domain Description: Phage_ASH Location: 133003-133096 bp Feature: gene Location: 133162-133632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)