myRT

myRT report for GCA_014495175.1_ASM1449517v1

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Seq: JACUXR010000004.1 Escherichia coli strain BA25514 4, whole genome shotgun sequence (309097 bp)
Overview 1 RT 1: 800-4270 bp Neighborhood of RT #1 [800, 4377] Arm-DNA-bind_3 RVT-Retrons PRK09678 Feature: gene Location: 800-1102 bp Feature: domain Description: Arm-DNA-bind_3 Location: 809-1061 bp Feature: domain Description: Arm-DNA-bind_3 Location: 809-1 061 bp Feature: gene Location: 1286-1531 bp Feature: gene Location: 1557-2489 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1659-2253 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 659-2253 bp Feature: gene Location: 2491-3477 bp Feature: gene Location: 4105-4377 bp Feature: domain Description: PRK09678 Location: 4114-4270 bp Feature: domain Description: PRK09678 Location: 41 1 4-4270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: JACUXR010000077.1 Escherichia coli strain BA25514 77, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACUXR010000008.1 Escherichia coli strain BA25514 8, whole genome shotgun sequence (159076 bp)
Overview 1 RT 1: 5886-10177 bp Neighborhood of RT #1 [5886, 10177] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 5886-7148 bp Feature: domain Description: YesM Location: 6399-7140 bp Feature: domain Description: YesM Location: 63 99-7140 bp Feature: gene Location: 7178-7348 bp Feature: gene Location: 7698-8219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7704-7986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7704-7986 bp Feature: domain Description: GIIM Note: maturase Location: 8034-8214 bp Feature: domain Description: GIIM Note: maturase Location: 803 4-8214 bp Feature: gene Location: 8247-8786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8577-8655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8577-8655 bp Feature: gene Location: 8817-9014 bp Feature: gene Location: 9272-10177 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)