myRT

myRT report for GCA_014495465.1_ASM1449546v1

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Seq: JACUXC010000031.1 (53309 bp)
Overview 1 RT 1: 8451-11769 bp 2 RT 2: 50181-53241 bp Neighborhood of RT #1 [8451, 11891] RVT_N RVT-GII GIIM HNHc DUF1380 Neighborhood of RT #2 [50181, 53306] DDE_Tnp_Tn3 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 8451-8726 bp Feature: gene Location: 8838-9020 bp Feature: gene Location: 9300-10967 bp Feature: domain Description: RVT_N Location: 9348-9585 bp Feature: domain Description: RVT_N Location: 9348-9585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9636-10278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9636-1 0278 bp Feature: domain Description: GIIM Note: maturase Location: 10329-10563 bp Feature: domain Description: GIIM Note: maturase Location: 1 0329-1 0563 bp Feature: domain Description: HNHc Note: nucleases Location: 10773-10932 bp Feature: domain Description: HNHc Note: nucleases Location: 1 0773-1 0932 bp Feature: gene Location: 11082-11417 bp Feature: gene Location: 11469-11891 bp Feature: domain Description: DUF1380 Location: 11472-11769 bp Feature: domain Description: DUF1 380 Location: 1 1 472-1 1 769 bp Feature: gene Location: 50181-50354 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 50184-50292 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 501 84-50292 bp Feature: gene Location: 50436-50882 bp Feature: domain Description: PHA02517 Location: 50439-50877 bp Feature: domain Description: PHA0251 7 Location: 50439-50877 bp Feature: gene Location: 51000-52523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51273-52005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 273-52005 bp Feature: domain Description: GIIM Note: maturase Location: 52080-52278 bp Feature: domain Description: GIIM Note: maturase Location: 52080-52278 bp Feature: gene Location: 52477-52902 bp Feature: gene Location: 53115-53306 bp Feature: domain Description: PHA02517 Location: 53118-53241 bp Feature: domain Description: PHA0251 7 Location: 531 1 8-53241 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128), DDE_Tnp_Tn3 (pfam01526), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JACUXC010000012.1 (120120 bp)
Overview 1 RT 1: 28739-34982 bp Neighborhood of RT #1 [28739, 35119] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 28739-29005 bp Feature: domain Description: Phage_integrase Location: 28805-28901 bp Feature: domain Description: Phage_integrase Location: 2 8805-2 8901 bp Feature: gene Location: 29088-29558 bp Feature: gene Location: 29905-33114 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30433-30922 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30433-3092 2 bp Feature: domain Description: nitrilase Location: 32428-33025 bp Feature: domain Description: nitrilase Location: 32 42 8-3302 5 bp Feature: gene Location: 33409-34212 bp Feature: domain Description: AbiEi_3_N Location: 33442-33703 bp Feature: domain Description: AbiEi_3_N Location: 33442 -33703 bp Feature: domain Description: AbiEi_3 Location: 33715-34171 bp Feature: domain Description: AbiEi_3 Location: 33715-34171 bp Feature: gene Location: 34199-35119 bp Feature: domain Description: AbiEii Location: 34241-34982 bp Feature: domain Description: AbiEii Location: 342 41-34982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)