myRT

myRT report for GCA_014495495.1_ASM1449549v1

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Seq: JACUWZ010000087.1 (985 bp)
Overview 1 RT 1: 1-984 bp Neighborhood of RT #1 [1, 983] RVT-GII Feature: gene Location: 1-363 bp Feature: gene Location: 657-983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACUWZ010000006.1 (314803 bp)
Overview 1 RT 1: 310457-314557 bp Neighborhood of RT #1 [310457, 314802] PRK09692 Tra5 RVT-GII GIIM Feature: gene Location: 310457-311647 bp Feature: domain Description: PRK09692 Location: 310463-311624 bp Feature: domain Description: PRK09692 Location: 310463-31162 4 bp Feature: gene Location: 313067-313498 bp Feature: domain Description: Tra5 Location: 313073-313490 bp Feature: domain Description: Tra5 Location: 313073-313490 bp Feature: gene Location: 313609-314802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 313612-314284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 313612 -3142 84 bp Feature: domain Description: GIIM Note: maturase Location: 314359-314557 bp Feature: domain Description: GIIM Note: maturase Location: 314359-314557 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), Tra5 (COG2801), RVT-GII, GIIM (pfam08388)

Seq: JACUWZ010000016.1 (154619 bp)
Overview 1 RT 1: 93493-97434 bp Neighborhood of RT #1 [93493, 97434] RVT-Retrons Feature: gene Location: 93493-94632 bp Feature: gene Location: 94678-94845 bp Feature: gene Location: 94867-96639 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 95026-95644 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 95026-95644 bp Feature: gene Location: 96860-97003 bp Feature: gene Location: 97195-97434 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: JACUWZ010000038.1 (10779 bp)
Overview 1 RT 1: 4680-7642 bp Neighborhood of RT #1 [4680, 10209] HEPN_Apea GerD RVT-UG1 Feature: gene Location: 4680-5780 bp Feature: domain Description: HEPN_Apea Location: 4749-5064 bp Feature: domain Description: HEPN_Apea Location: 4 74 9-5064 bp Feature: gene Location: 6077-6511 bp Feature: domain Description: GerD Location: 6155-6269 bp Feature: domain Description: GerD Location: 6155-6269 bp Feature: gene Location: 6520-10209 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 7132-7642 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 7132-764 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEPN_Apea (pfam18739), GerD (pfam17898), RVT-UG1