myRT

myRT report for GCA_014525255.1_ASM1452525v1

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Seq: JACGLY010000002.1 (2365353 bp)
Overview 1 RT 1: 943602-948906 bp Neighborhood of RT #1 [943602, 948917] SapB YegP RVT_N RVT-GII GIIM HNHc groEL Feature: gene Location: 943602-944072 bp Feature: domain Description: SapB Location: 943656-944043 bp Feature: domain Description: SapB Location: 943656-944043 bp Feature: gene Location: 944270-944422 bp Feature: domain Description: YegP Location: 944273-944390 bp Feature: domain Description: YegP Location: 944273-944390 bp Feature: gene Location: 944538-946256 bp Feature: domain Description: RVT_N Location: 944655-944898 bp Feature: domain Description: RVT_N Location: 944655-944898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 944943-945588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 944943-945588 bp Feature: domain Description: GIIM Note: maturase Location: 945642-945873 bp Feature: domain Description: GIIM Note: maturase Location: 945642-945873 bp Feature: domain Description: HNHc Note: nucleases Location: 946089-946251 bp Feature: domain Description: HNHc Note: nucleases Location: 946089-946251 bp Feature: gene Location: 946835-947029 bp Feature: gene Location: 947280-948917 bp Feature: domain Description: groEL Location: 947286-948906 bp Feature: domain Description: groEL Location: 947286-948906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SapB (smart00741), YegP (COG3422), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), groEL (PRK12852)

Seq: JACGLY010000001.1 (945524 bp)
Overview 1 RT 1: 239231-243034 bp Neighborhood of RT #1 [239231, 243045] RVT-UG16 IS285 Feature: gene Location: 239231-239404 bp Feature: gene Location: 239747-239881 bp Feature: gene Location: 240363-241448 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 240735-241137 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 2 40735-2 41137 bp Feature: gene Location: 241424-241774 bp Feature: gene Location: 241837-243045 bp Feature: domain Description: IS285 Location: 241879-243034 bp Feature: domain Description: IS2 85 Location: 2 41879-2 43034 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG16, IS285 (COG3328)