myRT

myRT report for GCA_014526265.2_ASM1452626v2

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Seq: JACJCW020000006.1 (15303 bp)
Overview 1 RT 1: 6571-11495 bp Neighborhood of RT #1 [6571, 11503] RVT-GII PRK10276 umuC Feature: gene Location: 6571-6927 bp Feature: gene Location: 7077-7694 bp Feature: gene Location: 7908-9395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8313-9003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 831 3-9003 bp Feature: gene Location: 9420-10232 bp Feature: domain Description: PRK10276 Location: 9852-10215 bp Feature: domain Description: PRK1 0276 Location: 9852-1 021 5 bp Feature: gene Location: 10232-11503 bp Feature: domain Description: umuC Location: 10235-11495 bp Feature: domain Description: umuC Location: 1 0235-1 1 495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: JACJCW020000001.1 (5409706 bp)
Overview 1 RT 1: 1192408-1198125 bp 2 RT 2: 1223239-1226314 bp 3 RT 3: 1400190-1403853 bp 4 RT 4: 1616018-1621211 bp 5 RT 5: 3212857-3216710 bp 6 RT 6: 3478016-3484733 bp 7 RT 7: 4033196-4036025 bp Neighborhood of RT #1 [1192408, 1198130] dam Phage_GPA RVT-GII DinI Neighborhood of RT #2 [1223239, 1226319] PRK09678 RVT-UG11 SmpB PRK10724 Neighborhood of RT #3 [1400190, 1403927] RVT-GII PRK10276 Terminase_2 Neighborhood of RT #4 [1616018, 1621261] IclR PRK15440 RVT-GII PRK15440 MFS_ExuT_GudP_like Neighborhood of RT #5 [3212857, 3216710] umuC PRK10276 RVT-GII Neighborhood of RT #6 [3478016, 3484735] asnC PRK10002 RVT-GII RVT-GII GIIM Porin_1 PRK09257 Neighborhood of RT #7 [4033196, 4036025] RVT-GII Feature: gene Location: 1192408-1193223 bp Feature: domain Description: dam Location: 1192411-1193146 bp Feature: domain Description: dam Location: 1192 411-1193146 bp Feature: gene Location: 1193220-1195634 bp Feature: domain Description: Phage_GPA Location: 1193784-1194750 bp Feature: domain Description: Phage_GPA Location: 1193784-1194750 bp Feature: gene Location: 1196110-1197597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1196515-1197205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1196515-11972 05 bp Feature: gene Location: 1197698-1197886 bp Feature: gene Location: 1197897-1198130 bp Feature: domain Description: DinI Location: 1197939-1198125 bp Feature: domain Description: DinI Location: 1197939-119812 5 bp Feature: gene Location: 1223239-1223457 bp Feature: domain Description: PRK09678 Location: 1223242-1223440 bp Feature: domain Description: PRK09678 Location: 12 2 32 42 -12 2 3440 bp Feature: gene Location: 1223704-1223892 bp Feature: gene Location: 1224335-1224634 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1224338-1224449 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 12 2 4338-12 2 4449 bp Feature: gene Location: 1225250-1225732 bp Feature: domain Description: SmpB Location: 1225280-1225724 bp Feature: domain Description: SmpB Location: 12 2 52 80-12 2 572 4 bp Feature: gene Location: 1225882-1226319 bp Feature: domain Description: PRK10724 Location: 1225885-1226314 bp Feature: domain Description: PRK1072 4 Location: 12 2 5885-12 2 6314 bp Feature: gene Location: 1400190-1400450 bp Feature: gene Location: 1400631-1400969 bp Feature: gene Location: 1401390-1402877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1401795-1402485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1401795-1402 485 bp Feature: gene Location: 1402956-1403285 bp Feature: domain Description: PRK10276 Location: 1402962-1403115 bp Feature: domain Description: PRK102 76 Location: 1402 962 -1403115 bp Feature: gene Location: 1403343-1403927 bp Feature: domain Description: Terminase_2 Location: 1403388-1403853 bp Feature: domain Description: Terminase_2 Location: 1403388-1403853 bp Feature: gene Location: 1616018-1616803 bp Feature: domain Description: IclR Location: 1616045-1616771 bp Feature: domain Description: IclR Location: 1616045-1616771 bp Feature: gene Location: 1616814-1616999 bp Feature: domain Description: PRK15440 Location: 1616817-1616964 bp Feature: domain Description: PRK15440 Location: 1616817-1616964 bp Feature: gene Location: 1617329-1618816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1617734-1618424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1617734-161842 4 bp Feature: gene Location: 1618907-1619929 bp Feature: domain Description: PRK15440 Location: 1618913-1619927 bp Feature: domain Description: PRK15440 Location: 1618913-161992 7 bp Feature: gene Location: 1619969-1621261 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 1620014-1621211 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 162 0014-162 12 11 bp Feature: gene Location: 3212857-3214122 bp Feature: domain Description: umuC Location: 3212860-3214120 bp Feature: domain Description: umuC Location: 32 12 860-32 1412 0 bp Feature: gene Location: 3214125-3214544 bp Feature: domain Description: PRK10276 Location: 3214128-3214539 bp Feature: domain Description: PRK102 76 Location: 32 1412 8-32 14539 bp Feature: gene Location: 3214623-3216107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3215025-3215715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 1502 5-32 15715 bp Feature: gene Location: 3216116-3216283 bp Feature: gene Location: 3216564-3216710 bp Feature: gene Location: 3478016-3479416 bp Feature: domain Description: asnC Location: 3478022-3479414 bp Feature: domain Description: asnC Location: 347802 2 -3479414 bp Feature: gene Location: 3480008-3480247 bp Feature: domain Description: PRK10002 Location: 3480011-3480203 bp Feature: domain Description: PRK10002 Location: 3480011-34802 03 bp Feature: gene Location: 3480839-3481483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3481112-3481463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3481112 -3481463 bp Feature: gene Location: 3481529-3482362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3481535-3481844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3481535-3481844 bp Feature: domain Description: GIIM Note: maturase Location: 3481919-3482117 bp Feature: domain Description: GIIM Note: maturase Location: 3481919-3482 117 bp Feature: gene Location: 3482524-3483357 bp Feature: domain Description: Porin_1 Location: 3482539-3483355 bp Feature: domain Description: Porin_1 Location: 3482 539-3483355 bp Feature: gene Location: 3483545-3484735 bp Feature: domain Description: PRK09257 Location: 3483548-3484733 bp Feature: domain Description: PRK092 57 Location: 3483548-3484733 bp Feature: gene Location: 4033196-4033402 bp Feature: gene Location: 4033513-4033749 bp Feature: gene Location: 4033826-4035310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4034228-4034918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40342 2 8-4034918 bp Feature: gene Location: 4035319-4035486 bp Feature: gene Location: 4035807-4036025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dam (TIGR00571), Phage_GPA (pfam05840), RVT-GII, DinI (pfam06183), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), Terminase_2 (pfam03592)
IclR (pfam01614), PRK15440 (L-rhamnonate dehydratase; Provisional), MFS_ExuT_GudP_like (cd17319), umuC (PRK03609), asnC (PRK03932), PRK10002 (porin OmpF), GIIM (pfam08388), Porin_1 (pfam00267), PRK09257 (aromatic amino acid transaminase)

Seq: JACJCW020000002.1 (238366 bp)
Overview 1 RT 1: 227188-231456 bp Neighborhood of RT #1 [227188, 231461] RVT-GII PRK10276 umuC Feature: gene Location: 227188-227346 bp Feature: gene Location: 227411-227641 bp Feature: gene Location: 227875-229362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 228280-228970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 228280-228970 bp Feature: gene Location: 229492-230190 bp Feature: domain Description: PRK10276 Location: 229768-230176 bp Feature: domain Description: PRK10276 Location: 229768-23 0176 bp Feature: gene Location: 230190-231461 bp Feature: domain Description: umuC Location: 230193-231456 bp Feature: domain Description: umuC Location: 23 0193 -23 1456 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)