myRT

myRT report for GCA_014534025.1_ASM1453402v1

Download annotations/find similar RTs

Seq: JACVSH010000335.1 (4652 bp)
Overview 1 RT 1: 2339-4650 bp Neighborhood of RT #1 [2339, 4649] HTH_33 DDE_3 HTH_23 RVT-GII RVT-GII GIIM Feature: gene Location: 2339-2992 bp Feature: domain Description: HTH_33 Location: 2342-2408 bp Feature: domain Description: HTH_33 Location: 2342-2408 bp Feature: domain Description: DDE_3 Location: 2483-2897 bp Feature: domain Description: DDE_3 Location: 2483-2897 bp Feature: gene Location: 3123-3341 bp Feature: domain Description: HTH_23 Location: 3156-3291 bp Feature: domain Description: HTH_23 Location: 31 56-3291 bp Feature: gene Location: 3442-4101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3739-3958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3739-3958 bp Feature: gene Location: 4109-4435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4121-4331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 21 -4331 bp Feature: gene Location: 4380-4649 bp Feature: domain Description: GIIM Note: maturase Location: 4428-4650 bp Feature: domain Description: GIIM Note: maturase Location: 4428-4650 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_33 (pfam13592), DDE_3 (pfam13358), HTH_23 (pfam13384), RVT-GII, GIIM (pfam08388)

Seq: JACVSH010000456.1 (3924 bp)
Overview 1 RT 1: 1894-3752 bp Neighborhood of RT #1 [1894, 3752] RVT-GII Feature: gene Location: 1894-2043 bp Feature: gene Location: 2181-2537 bp Feature: gene Location: 2497-3468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2716-3322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 716-332 2 bp Feature: gene Location: 3573-3752 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACVSH010000640.1 (3218 bp)
Overview 1 RT 1: 647-2782 bp Neighborhood of RT #1 [647, 2782] RVT-GII GIIM PIN_VapC-like Feature: gene Location: 647-1891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 857-1511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 857-1511 bp Feature: domain Description: GIIM Note: maturase Location: 1607-1829 bp Feature: domain Description: GIIM Note: maturase Location: 1607-1829 bp Feature: gene Location: 2161-2625 bp Feature: domain Description: PIN_VapC-like Location: 2173-2542 bp Feature: domain Description: PIN_VapC-like Location: 2173 -2542 bp Feature: gene Location: 2612-2782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PIN_VapC-like (cd18715)

Seq: JACVSH010001556.1 (1605 bp)
Overview 1 RT 1: 176-1532 bp Neighborhood of RT #1 [176, 1549] GATase1_PfpI_3 RVT-GII GIIM Feature: gene Location: 176-589 bp Feature: domain Description: GATase1_PfpI_3 Location: 194-584 bp Feature: domain Description: GATase1_PfpI_3 Location: 194 -584 bp Feature: gene Location: 714-1052 bp Feature: gene Location: 1076-1549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1085-1319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1085-1319 bp Feature: domain Description: GIIM Note: maturase Location: 1397-1532 bp Feature: domain Description: GIIM Note: maturase Location: 1397-1532 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GATase1_PfpI_3 (cd03140), RVT-GII, GIIM (pfam08388)