myRT

myRT report for GCA_014584465.1_ASM1458446v1

Download annotations/find similar RTs

Seq: JACTMU010000016.1 (34568 bp)
Overview 1 RT 1: 29167-33645 bp Neighborhood of RT #1 [29167, 33686] upstrm_HI1419 COG1373 RVT-GII Transposase_mut Feature: gene Location: 29167-29517 bp Feature: domain Description: upstrm_HI1419 Location: 29209-29482 bp Feature: domain Description: upstrm_HI1 41 9 Location: 29209-29482 bp Feature: gene Location: 29793-30920 bp Feature: domain Description: COG1373 Location: 29808-30885 bp Feature: domain Description: COG1 373 Location: 29808-30885 bp Feature: gene Location: 30950-32215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31241-31892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 241 -31 892 bp Feature: gene Location: 32263-32730 bp Feature: gene Location: 33111-33686 bp Feature: domain Description: Transposase_mut Location: 33123-33645 bp Feature: domain Description: Transposase_mut Location: 331 23-33645 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT upstrm_HI1419 (TIGR02683), COG1373 (Predicted ATPase, AAA+ superfamily ), RVT-GII, Transposase_mut (pfam00872)

Seq: JACTMU010000037.1 (3301 bp)
Overview 1 RT 1: 222-2546 bp Neighborhood of RT #1 [222, 2551] RVT_N RVT-GII mob_myst_B Feature: gene Location: 222-401 bp Feature: gene Location: 564-1418 bp Feature: domain Description: RVT_N Location: 567-759 bp Feature: domain Description: RVT_N Location: 567-759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 804-1389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 804-1389 bp Feature: gene Location: 1459-1878 bp Feature: gene Location: 1955-2551 bp Feature: domain Description: mob_myst_B Location: 1988-2546 bp Feature: domain Description: mob_myst_B Location: 1988-2 546 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, mob_myst_B (TIGR02613)

Seq: JACTMU010000115.1 (10049 bp)
Overview 1 RT 1: 7498-9760 bp Neighborhood of RT #1 [7498, 9822] SRAP KOG2415 RVT-GII Feature: gene Location: 7498-8454 bp Feature: domain Description: SRAP Location: 7822-8419 bp Feature: domain Description: SRAP Location: 7822-8419 bp Feature: gene Location: 8888-9484 bp Feature: domain Description: KOG2415 Location: 8963-9458 bp Feature: domain Description: KOG2415 Location: 8963 -9458 bp Feature: gene Location: 9664-9822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9667-9760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9667-9760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SRAP (pfam02586), KOG2415 (KOG2415, Electron transfer flavoprotein ubiquinone oxidoreductase ), RVT-GII

Seq: JACTMU010000066.1 (6127 bp)
Overview 1 RT 1: 3181-5997 bp Neighborhood of RT #1 [3181, 6086] Lactonase Lactonase Pgl RVT-GII Feature: gene Location: 3181-4416 bp Feature: domain Description: Lactonase Location: 3385-3556 bp Feature: domain Description: Lactonase Location: 3385-3556 bp Feature: domain Description: Lactonase Location: 3865-4057 bp Feature: domain Description: Lactonase Location: 3865-4 057 bp Feature: domain Description: Pgl Location: 4072-4360 bp Feature: domain Description: Pgl Location: 4 072-4 360 bp Feature: gene Location: 4470-5606 bp Feature: gene Location: 5829-6086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5832-5997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5832-5997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lactonase (pfam10282), Pgl (COG2706), RVT-GII

Seq: JACTMU010000116.1 (5634 bp)
Overview 1 RT 1: 4923-5617 bp Neighborhood of RT #1 [4923, 5631] RelE_StbE HTH_XRE RVT-DGRs Feature: gene Location: 4923-5198 bp Feature: domain Description: RelE_StbE Location: 4950-5190 bp Feature: domain Description: RelE_StbE Location: 495 0-5 190 bp Feature: gene Location: 5188-5505 bp Feature: domain Description: HTH_XRE Location: 5251-5413 bp Feature: domain Description: HTH_XRE Location: 5 25 1-5 413 bp Feature: gene Location: 5506-5631 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5560-5617 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5 5 60-5 617 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelE_StbE (TIGR02385), HTH_XRE (smart00530), RVT-DGRs