myRT

myRT report for GCA_014584675.1_ASM1458467v1

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Seq: JACTMK010000224.1 (3659 bp)
Overview 1 RT 1: 1-3382 bp Neighborhood of RT #1 [1, 3417] Cas_Cas02710 Cas_csx3 RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 1-972 bp Feature: domain Description: Cas_Cas02710 Location: 787-901 bp Feature: domain Description: Cas_Cas0271 0 Location: 787-901 bp Feature: gene Location: 1047-1208 bp Feature: domain Description: Cas_csx3 Location: 1074-1200 bp Feature: domain Description: Cas_csx3 Location: 1 074-1 200 bp Feature: gene Location: 1211-2155 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1412-2009 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 41 2-2009 bp Feature: gene Location: 2137-3138 bp Feature: domain Description: Cas1_I-II-III Location: 2146-3100 bp Feature: domain Description: Cas1 _I-II-III Location: 21 46-31 00 bp Feature: gene Location: 3142-3417 bp Feature: domain Description: Cas2_I_II_III Location: 3151-3382 bp Feature: domain Description: Cas2_I_II_III Location: 31 51 -3382 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cas02710 (pfam09670), Cas_csx3 (pfam09620), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: JACTMK010000035.1 (5928 bp)
Overview 1 RT 1: 3787-5861 bp Neighborhood of RT #1 [3787, 5926] RVT_N RVT_N RVT-GII RVT-GII GIIM Feature: gene Location: 3787-4008 bp Feature: gene Location: 4715-4846 bp Feature: domain Description: RVT_N Location: 4769-4841 bp Feature: domain Description: RVT_N Location: 4769-4841 bp Feature: gene Location: 4902-5159 bp Feature: domain Description: RVT_N Location: 4908-4995 bp Feature: domain Description: RVT_N Location: 4908-4995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5046-5154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5046-5154 bp Feature: gene Location: 5330-5926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5336-5666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5336-5666 bp Feature: domain Description: GIIM Note: maturase Location: 5723-5861 bp Feature: domain Description: GIIM Note: maturase Location: 572 3-5861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)