myRT

myRT report for GCA_014595955.1_ASM1459595v1

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Seq: JABVCF010000008.1 (300358 bp)
Overview 1 RT 1: 25365-30546 bp Neighborhood of RT #1 [25365, 30557] INT_C_like_1 RVT-UNC HTH_MerR-trunc OBF_DNA_ligase_LigD Feature: gene Location: 25365-26360 bp Feature: gene Location: 26492-28243 bp Feature: domain Description: INT_C_like_1 Location: 27554-28139 bp Feature: domain Description: INT_C_like_1 Location: 27554-281 39 bp Feature: gene Location: 28367-29752 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 29147-29354 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 291 47-29354 bp Feature: gene Location: 29752-29940 bp Feature: domain Description: HTH_MerR-trunc Location: 29791-29917 bp Feature: domain Description: HTH_MerR-trunc Location: 29791 -2991 7 bp Feature: gene Location: 30351-30557 bp Feature: domain Description: OBF_DNA_ligase_LigD Location: 30390-30546 bp Feature: domain Description: OBF_DNA_ligase_LigD Location: 30390-30546 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_C_like_1 (cd01184), RVT-UG11/RVT-CRISPR/RVT-GII/RVT-UG4(RVT-UNC), HTH_MerR-trunc (cd04762), OBF_DNA_ligase_LigD (cd07971)

Seq: JABVCF010000011.1 (250294 bp)
Overview 1 RT 1: 4847-12775 bp Neighborhood of RT #1 [4847, 13338] Mrr RVT_1 RVT-UNC HTH_17 Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 4847-8479 bp Feature: gene Location: 8530-9438 bp Feature: domain Description: Mrr Location: 8533-9433 bp Feature: domain Description: Mrr Location: 8533-9433 bp Feature: gene Location: 9456-10862 bp Feature: domain Description: RVT_1 Location: 9831-10053 bp Feature: domain Description: RVT_1 Location: 9831-10053 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 10248-10458 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 102 48-10458 bp Feature: gene Location: 10865-11104 bp Feature: domain Description: HTH_17 Location: 10955-11099 bp Feature: domain Description: HTH_17 Location: 10955-11099 bp Feature: gene Location: 11704-13338 bp Feature: domain Description: Resolvase Location: 11716-12145 bp Feature: domain Description: Resolvase Location: 11716-12 145 bp Feature: domain Description: Recombinase Location: 12217-12547 bp Feature: domain Description: Recombinase Location: 12 2 17-12 547 bp Feature: domain Description: Zn_ribbon_recom Location: 12604-12775 bp Feature: domain Description: Zn_ribbon_recom Location: 12 604-12 775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mrr (COG1715), RVT_1 (pfam00078), RVT-UG11/RVT-UG4/RVT-CRISPR/RVT-Retrons(RVT-UNC), HTH_17 (pfam12728), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)

Seq: JABVCF010000024.1 (51526 bp)
Overview 1 RT 1: 25685-29137 bp Neighborhood of RT #1 [25685, 29137] RVT-GII Feature: gene Location: 25685-26215 bp Feature: gene Location: 26240-26371 bp Feature: gene Location: 26628-28181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27102-27789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27102-27789 bp Feature: gene Location: 28250-28402 bp Feature: gene Location: 28553-29137 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII