myRT

myRT report for GCA_014596335.1_ASM1459633v1

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Seq: LGKE01000008.1 (2439 bp)
Overview 1 RT 1: 681-1974 bp Neighborhood of RT #1 [681, 2327] RVT_N RVT-GII GIIM Feature: gene Location: 681-2327 bp Feature: domain Description: RVT_N Location: 723-960 bp Feature: domain Description: RVT_N Location: 723-960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1014-1674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 4-1 674 bp Feature: domain Description: GIIM Note: maturase Location: 1743-1974 bp Feature: domain Description: GIIM Note: maturase Location: 1 743-1 974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LGKE01000002.1 (7339 bp)
Overview 1 RT 1: 516-5407 bp Neighborhood of RT #1 [516, 5407] RVT-GII HNHc MTS Feature: gene Location: 516-929 bp Feature: gene Location: 951-1088 bp Feature: gene Location: 1970-3898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2291-3026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 91-302 6 bp Feature: domain Description: HNHc Note: nucleases Location: 3617-3782 bp Feature: domain Description: HNHc Note: nucleases Location: 3617-3782 bp Feature: gene Location: 4043-5164 bp Feature: domain Description: MTS Location: 4139-4502 bp Feature: domain Description: MTS Location: 4139-4502 bp Feature: gene Location: 5180-5407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LGKE01000018.1 (878 bp)
Overview 1 RT 1: 3-753 bp Neighborhood of RT #1 [3, 875] RVT-GII Feature: gene Location: 3-875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48-753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48-753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LGKE01000146.1 (20890 bp)
Overview 1 RT 1: 3-5238 bp Neighborhood of RT #1 [3, 5238] RVT-GII GIIM TraG-D_C Ftsk_gamma Ftsk_gamma Feature: gene Location: 3-1037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-384 bp Feature: domain Description: GIIM Note: maturase Location: 453-684 bp Feature: domain Description: GIIM Note: maturase Location: 4 53-684 bp Feature: gene Location: 1250-4750 bp Feature: domain Description: TraG-D_C Location: 2867-3227 bp Feature: domain Description: TraG-D_C Location: 2867-3227 bp Feature: domain Description: Ftsk_gamma Location: 3635-3812 bp Feature: domain Description: Ftsk_gamma Location: 3635-3812 bp Feature: domain Description: Ftsk_gamma Location: 3944-4079 bp Feature: domain Description: Ftsk_gamma Location: 394 4 -4 079 bp Feature: gene Location: 4768-5238 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LGKE01000029.1 (15913 bp)
Overview 1 RT 1: 5833-10642 bp Neighborhood of RT #1 [5833, 10647] COG4712 RVT-GII beta_clamp Feature: gene Location: 5833-6189 bp Feature: domain Description: COG4712 Location: 5842-6184 bp Feature: domain Description: COG4712 Location: 5 842-6184 bp Feature: gene Location: 6613-6753 bp Feature: gene Location: 6948-8849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7266-7968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7266-7968 bp Feature: gene Location: 8927-9454 bp Feature: gene Location: 9535-10647 bp Feature: domain Description: beta_clamp Location: 9538-10642 bp Feature: domain Description: beta_clamp Location: 95 38-10642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LGKE01000190.1 (41689 bp)
Overview 1 RT 1: 776-4032 bp Neighborhood of RT #1 [776, 4205] RVT-GII HNHc DUF2185 metallo-hydrolase-like_MBL-fold Feature: gene Location: 776-2704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1097-1832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1097-1832 bp Feature: domain Description: HNHc Note: nucleases Location: 2423-2588 bp Feature: domain Description: HNHc Note: nucleases Location: 2423-2588 bp Feature: gene Location: 2985-3230 bp Feature: domain Description: DUF2185 Location: 2988-3192 bp Feature: domain Description: DUF2185 Location: 2988-3192 bp Feature: gene Location: 3324-4205 bp Feature: domain Description: metallo-hydrolase-like_MBL-fold Location: 3414-4032 bp Feature: domain Description: metallo-hydrolase-like_MBL-fold Location: 3414-4032 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LGKE01000173.1 (92727 bp)
Overview 1 RT 1: 3-3398 bp 2 RT 2: 69893-78050 bp Neighborhood of RT #1 [3, 3430] RVT-GII GIIM stp Neighborhood of RT #2 [69893, 78050] YbaK_EbsC GrpB RVT_N RVT-GII GIIM TraG-D_C Ftsk_gamma Ftsk_gamma Feature: gene Location: 3-1037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-384 bp Feature: domain Description: GIIM Note: maturase Location: 453-684 bp Feature: domain Description: GIIM Note: maturase Location: 453-684 bp Feature: gene Location: 1169-1333 bp Feature: gene Location: 2111-3430 bp Feature: domain Description: stp Location: 2198-3398 bp Feature: domain Description: stp Location: 2198-3398 bp Feature: gene Location: 69893-70369 bp Feature: domain Description: YbaK_EbsC Location: 69911-70361 bp Feature: domain Description: YbaK_EbsC Location: 69911-7 0361 bp Feature: gene Location: 70956-71486 bp Feature: domain Description: GrpB Location: 70968-71442 bp Feature: domain Description: GrpB Location: 7 0968-7 1442 bp Feature: gene Location: 72203-73849 bp Feature: domain Description: RVT_N Location: 72245-72482 bp Feature: domain Description: RVT_N Location: 7 2245-7 2482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72536-73196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 2536-7 3196 bp Feature: domain Description: GIIM Note: maturase Location: 73265-73496 bp Feature: domain Description: GIIM Note: maturase Location: 7 3265-7 3496 bp Feature: gene Location: 74062-77562 bp Feature: domain Description: TraG-D_C Location: 75679-76039 bp Feature: domain Description: TraG-D_C Location: 7 567 9-7 6039 bp Feature: domain Description: Ftsk_gamma Location: 76447-76624 bp Feature: domain Description: Ftsk_gamma Location: 7 6447 -7 6624 bp Feature: domain Description: Ftsk_gamma Location: 76756-76891 bp Feature: domain Description: Ftsk_gamma Location: 7 67 56-7 6891 bp Feature: gene Location: 77580-78050 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LGKE01000118.1 (59437 bp)
Overview 1 RT 1: 180-4625 bp Neighborhood of RT #1 [180, 4660] RVT-GII HNHc B_ant_repeat B_ant_repeat B_ant_repeat CcdC Feature: gene Location: 180-2108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 501-1236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 501-1236 bp Feature: domain Description: HNHc Note: nucleases Location: 1827-1992 bp Feature: domain Description: HNHc Note: nucleases Location: 18 27-1992 bp Feature: gene Location: 2810-4090 bp Feature: domain Description: B_ant_repeat Location: 2888-2999 bp Feature: domain Description: B_ant_repeat Location: 28 8 8 -2999 bp Feature: domain Description: B_ant_repeat Location: 3239-3395 bp Feature: domain Description: B_ant_repeat Location: 3239-3395 bp Feature: domain Description: B_ant_repeat Location: 3638-3794 bp Feature: domain Description: B_ant_repeat Location: 3638 -3794 bp Feature: gene Location: 4154-4660 bp Feature: domain Description: CcdC Location: 4163-4625 bp Feature: domain Description: CcdC Location: 4163-4625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LGKE01000114.1 (88313 bp)
Overview 1 RT 1: 85361-88128 bp Neighborhood of RT #1 [85361, 88244] RVT-GII HNHc Feature: gene Location: 85361-85696 bp Feature: gene Location: 85843-86019 bp Feature: gene Location: 86412-88244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86712-87417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86712-87417 bp Feature: domain Description: HNHc Note: nucleases Location: 87996-88128 bp Feature: domain Description: HNHc Note: nucleases Location: 879 9 6-88128 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LGKE01000053.1 (9462 bp)
Overview 1 RT 1: 5913-9107 bp Neighborhood of RT #1 [5913, 9460] Hydrolase_4 HTH_3 TPR RVT-GII GIIM Feature: gene Location: 5913-6929 bp Feature: domain Description: Hydrolase_4 Location: 6075-6735 bp Feature: domain Description: Hydrolase_4 Location: 6075-6735 bp Feature: gene Location: 6942-8066 bp Feature: domain Description: HTH_3 Location: 6972-7134 bp Feature: domain Description: HTH_3 Location: 6972-7134 bp Feature: domain Description: TPR Location: 7698-7821 bp Feature: domain Description: TPR Location: 7698-7821 bp Feature: gene Location: 8426-9460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8435-8807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8435-8807 bp Feature: domain Description: GIIM Note: maturase Location: 8876-9107 bp Feature: domain Description: GIIM Note: maturase Location: 8876-910 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LGKE01000167.1 (47770 bp)
Overview 1 RT 1: 165-4228 bp 2 RT 2: 44237-47415 bp Neighborhood of RT #1 [165, 4228] RVT-GII HNHc AAA_10 Neighborhood of RT #2 [44237, 47768] ParM_like NlpD RVT-GII GIIM Feature: gene Location: 165-341 bp Feature: gene Location: 734-2566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034-1739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034-1739 bp Feature: domain Description: HNHc Note: nucleases Location: 2318-2450 bp Feature: domain Description: HNHc Note: nucleases Location: 2318-2450 bp Feature: gene Location: 2635-3660 bp Feature: domain Description: AAA_10 Location: 2686-3613 bp Feature: domain Description: AAA_10 Location: 2686-3613 bp Feature: gene Location: 3704-4228 bp Feature: gene Location: 44237-45403 bp Feature: domain Description: ParM_like Location: 44303-45362 bp Feature: domain Description: ParM_like Location: 44303-45362 bp Feature: gene Location: 45974-46540 bp Feature: domain Description: NlpD Location: 46178-46529 bp Feature: domain Description: NlpD Location: 46178-46529 bp Feature: gene Location: 46734-47768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46743-47115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46743-4711 5 bp Feature: domain Description: GIIM Note: maturase Location: 47184-47415 bp Feature: domain Description: GIIM Note: maturase Location: 47184-47415 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT