myRT

myRT report for GCA_014596845.1_ASM1459684v1

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Seq: JACVDB010000005.1 (366551 bp)
Overview 1 RT 1: 345054-349766 bp Neighborhood of RT #1 [345054, 349831] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 345054-346505 bp Feature: gene Location: 346674-347120 bp Feature: domain Description: PHA02517 Location: 346677-347118 bp Feature: domain Description: PHA0251 7 Location: 346677-3471 1 8 bp Feature: gene Location: 347237-348760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347510-348242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34751 0-348242 bp Feature: domain Description: GIIM Note: maturase Location: 348317-348515 bp Feature: domain Description: GIIM Note: maturase Location: 34831 7-34851 5 bp Feature: gene Location: 348714-349139 bp Feature: gene Location: 349352-349831 bp Feature: domain Description: PHA02517 Location: 349412-349766 bp Feature: domain Description: PHA0251 7 Location: 34941 2-349766 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JACVDB010000008.1 (164819 bp)
Overview 1 RT 1: 68693-72767 bp Neighborhood of RT #1 [68693, 72767] RVT-Retrons Feature: gene Location: 68693-69214 bp Feature: gene Location: 69321-69533 bp Feature: gene Location: 69721-71490 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 69880-70501 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 69880-70501 bp Feature: gene Location: 71921-72607 bp Feature: gene Location: 72609-72767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: JACVDB010000012.1 (321620 bp)
Overview 1 RT 1: 12446-18021 bp Neighborhood of RT #1 [12446, 18128] RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 12446-12625 bp Feature: gene Location: 12670-12810 bp Feature: gene Location: 12949-16164 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 13480-13969 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 13 480-13 969 bp Feature: domain Description: nitrilase Location: 15478-16075 bp Feature: domain Description: nitrilase Location: 15478-16075 bp Feature: gene Location: 16430-17212 bp Feature: domain Description: AbiEi_3_N Location: 16436-16703 bp Feature: domain Description: AbiEi_3 _N Location: 1643 6-16703 bp Feature: domain Description: AbiEi_3 Location: 16718-17171 bp Feature: domain Description: AbiEi_3 Location: 16718-17171 bp Feature: gene Location: 17199-18128 bp Feature: domain Description: AbiEii Location: 17238-18021 bp Feature: domain Description: AbiEii Location: 1723 8-18021 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)