myRT

myRT report for GCA_014695485.1_ASM1469548v1

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Seq: JACJOI010000059.1 (34874 bp)
Overview 1 RT 1: 14286-17385 bp Neighborhood of RT #1 [14286, 17385] Phage_integrase RVT-Retrons HTH_XRE Feature: gene Location: 14286-14927 bp Feature: domain Description: Phage_integrase Location: 14331-14817 bp Feature: domain Description: Phage_integrase Location: 1 4331 -1 481 7 bp Feature: gene Location: 15050-15796 bp Feature: gene Location: 15826-16677 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15931-16474 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 5931 -1 6474 bp Feature: gene Location: 16718-17026 bp Feature: domain Description: HTH_XRE Location: 16730-16892 bp Feature: domain Description: HTH_XRE Location: 1 6730-1 6892 bp Feature: gene Location: 17152-17385 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-Retrons, HTH_XRE (smart00530)

Seq: JACJOI010000039.1 (30891 bp)
Overview 1 RT 1: 7271-14477 bp Neighborhood of RT #1 [7271, 14477] WGR PQQ vWA_subgroup RVT-Retrons Feature: gene Location: 7271-8752 bp Feature: domain Description: WGR Location: 7343-7583 bp Feature: domain Description: WGR Location: 7343-7583 bp Feature: domain Description: PQQ Location: 7619-8438 bp Feature: domain Description: PQQ Location: 7619-8438 bp Feature: gene Location: 8968-10806 bp Feature: domain Description: vWA_subgroup Location: 9091-9598 bp Feature: domain Description: vWA_subgroup Location: 9091-9598 bp Feature: gene Location: 11034-12437 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11580-12198 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11580-12 198 bp Feature: gene Location: 12525-12725 bp Feature: gene Location: 12837-14477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR (smart00773), PQQ (smart00564), vWA_subgroup (cd01465), RVT-Retrons

Seq: JACJOI010000048.1 (116746 bp)
Overview 1 RT 1: 2613-6329 bp 2 RT 2: 73129-77296 bp 3 RT 3: 80550-84241 bp 4 RT 4: 93886-99913 bp Neighborhood of RT #1 [2613, 6376] MetOD1 RVT-UG7 YjbI Pentapeptide Neighborhood of RT #2 [73129, 77334] AdaB XisI RVT-UG16 COG1848 Neighborhood of RT #3 [80550, 84258] group_II_RT_mat RVT-UG13 DUF433 COG4634 Neighborhood of RT #4 [93886, 101352] RVT-UG12 PMT_2 PMT_2 Feature: gene Location: 2613-3173 bp Feature: domain Description: MetOD1 Location: 2754-3081 bp Feature: domain Description: MetOD1 Location: 2754-3 081 bp Feature: gene Location: 3263-3412 bp Feature: gene Location: 3454-5031 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3835-4267 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3 83 5-4267 bp Feature: gene Location: 5211-5390 bp Feature: gene Location: 5600-6376 bp Feature: domain Description: YjbI Location: 5711-6185 bp Feature: domain Description: YjbI Location: 5711-6185 bp Feature: domain Description: Pentapeptide Location: 6215-6329 bp Feature: domain Description: Pentapeptide Location: 6215-63 29 bp Feature: gene Location: 73129-73854 bp Feature: domain Description: AdaB Location: 73342-73801 bp Feature: domain Description: AdaB Location: 73 3 42-73 801 bp Feature: gene Location: 74097-74441 bp Feature: domain Description: XisI Location: 74100-74433 bp Feature: domain Description: XisI Location: 74100-7443 3 bp Feature: gene Location: 74690-76174 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 75059-75461 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 75059-75461 bp Feature: gene Location: 76628-76873 bp Feature: gene Location: 76870-77334 bp Feature: domain Description: COG1848 Location: 76882-77296 bp Feature: domain Description: COG1848 Location: 76882-77296 bp Feature: gene Location: 80550-80765 bp Feature: gene Location: 80758-81189 bp Feature: gene Location: 81603-83417 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 81735-81939 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 8173 5-8193 9 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 82020-82485 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 82020-82485 bp Feature: gene Location: 83699-83923 bp Feature: domain Description: DUF433 Location: 83723-83888 bp Feature: domain Description: DUF43 3 Location: 83 723 -83 888 bp Feature: gene Location: 83920-84258 bp Feature: domain Description: COG4634 Location: 83923-84241 bp Feature: domain Description: COG463 4 Location: 83 923 -84241 bp Feature: gene Location: 93886-94614 bp Feature: gene Location: 95154-95357 bp Feature: gene Location: 95415-96977 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 95769-96204 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 95769-96204 bp Feature: gene Location: 97468-98943 bp Feature: domain Description: PMT_2 Location: 97648-98041 bp Feature: domain Description: PMT_2 Location: 97648-98041 bp Feature: gene Location: 99235-101352 bp Feature: domain Description: PMT_2 Location: 99574-99913 bp Feature: domain Description: PMT_2 Location: 99574-99913 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MetOD1 (pfam18546), RVT-UG7, YjbI (COG2346), Pentapeptide (pfam00805), AdaB (COG0350), XisI (pfam08869), RVT-UG16, COG1848 (Predicted nucleic acid-binding protein, contains PIN domain ), group_II_RT_mat (TIGR04416), RVT-UG13
DUF433 (pfam04255), COG4634 (Predicted nuclease, contains PIN domain, potential toxin-antitoxin system component ), RVT-UG12, PMT_2 (pfam13231)