myRT

myRT report for GCA_014695795.1_ASM1469579v1

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Seq: JACJOZ010000036.1 (37020 bp)
Overview 1 RT 1: 10929-16673 bp Neighborhood of RT #1 [10929, 16681] FadM RVT-GII GIIM McrA RVT-GII RVT_N RVT-GII PRK11466 BaeS Feature: gene Location: 10929-11420 bp Feature: domain Description: FadM Location: 10956-11349 bp Feature: domain Description: FadM Location: 1 0956-1 1 349 bp Feature: gene Location: 11472-11651 bp Feature: gene Location: 11667-13112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11748-12381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 748-1 2381 bp Feature: domain Description: GIIM Note: maturase Location: 12525-12729 bp Feature: domain Description: GIIM Note: maturase Location: 1 2525-1 2729 bp Feature: domain Description: McrA Location: 12801-13086 bp Feature: domain Description: McrA Location: 1 2801 -1 3086 bp Feature: gene Location: 13126-13638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13150-13597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 50-1 3597 bp Feature: gene Location: 13705-14124 bp Feature: domain Description: RVT_N Location: 13735-13981 bp Feature: domain Description: RVT_N Location: 1 3735-1 3981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14026-14122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4026-1 41 22 bp Feature: gene Location: 14128-14424 bp Feature: gene Location: 15383-16681 bp Feature: domain Description: PRK11466 Location: 15407-15686 bp Feature: domain Description: PRK1 1 466 Location: 1 5407-1 5686 bp Feature: domain Description: BaeS Location: 15719-16673 bp Feature: domain Description: BaeS Location: 1 571 9-1 6673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FadM (COG0824), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655), PRK11466 (hybrid sensory histidine kinase TorS; Provisional), BaeS (COG0642)

Seq: JACJOZ010000005.1 (10871 bp)
Overview 1 RT 1: 1-3055 bp Neighborhood of RT #1 [1, 3055] RVT_N RVT-GII GIIM McrA Feature: gene Location: 1-141 bp Feature: gene Location: 163-1851 bp Feature: domain Description: RVT_N Location: 232-478 bp Feature: domain Description: RVT_N Location: 2 32 -478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 520-1168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 0-1168 bp Feature: domain Description: GIIM Note: maturase Location: 1246-1480 bp Feature: domain Description: GIIM Note: maturase Location: 12 46-1480 bp Feature: domain Description: McrA Location: 1546-1819 bp Feature: domain Description: McrA Location: 1546-1819 bp Feature: gene Location: 2361-2582 bp Feature: gene Location: 2741-3055 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JACJOZ010000070.1 (37607 bp)
Overview 1 RT 1: 334-4126 bp Neighborhood of RT #1 [334, 4126] RAYT RVT-GII GIIM HNHc Beta-lactamase2 Feature: gene Location: 334-753 bp Feature: domain Description: RAYT Location: 349-727 bp Feature: domain Description: RAYT Location: 3 49-727 bp Feature: gene Location: 831-1886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 846-1143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 846-1143 bp Feature: domain Description: GIIM Note: maturase Location: 1263-1467 bp Feature: domain Description: GIIM Note: maturase Location: 1263 -1467 bp Feature: domain Description: HNHc Note: nucleases Location: 1659-1815 bp Feature: domain Description: HNHc Note: nucleases Location: 1659-1815 bp Feature: gene Location: 2010-2978 bp Feature: domain Description: Beta-lactamase2 Location: 2244-2889 bp Feature: domain Description: Beta-lactamase2 Location: 2244-2889 bp Feature: gene Location: 3497-4126 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RAYT (COG1943), RVT-GII, GIIM (pfam08388), HNHc (smart00507), Beta-lactamase2 (pfam13354)

Seq: JACJOZ010000085.1 (33642 bp)
Overview 1 RT 1: 30690-33271 bp Neighborhood of RT #1 [30690, 33271] RVT-GII Feature: gene Location: 30690-30824 bp Feature: gene Location: 30928-31056 bp Feature: gene Location: 31074-31298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31080-31191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31080-31191 bp Feature: gene Location: 31994-33271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACJOZ010000043.1 (113940 bp)
Overview 1 RT 1: 3-6250 bp Neighborhood of RT #1 [3, 6250] Cas10_III Cas_Cas02710 RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 3-1196 bp Feature: domain Description: Cas10_III Location: 30-1194 bp Feature: domain Description: Cas10_III Location: 30-1194 bp Feature: gene Location: 1473-2321 bp Feature: domain Description: Cas_Cas02710 Location: 2067-2235 bp Feature: domain Description: Cas_Cas02710 Location: 2067-2235 bp Feature: gene Location: 2311-4404 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2524-3127 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 25 24-3127 bp Feature: domain Description: Cas1_I-II-III Location: 3400-4369 bp Feature: domain Description: Cas1_I-II-III Location: 3400-4369 bp Feature: gene Location: 4404-4679 bp Feature: domain Description: Cas2_I_II_III Location: 4413-4641 bp Feature: domain Description: Cas2_I_II_III Location: 4413-4641 bp Feature: gene Location: 6083-6250 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas10_III (cl21742), Cas_Cas02710 (pfam09670), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)