myRT

myRT report for GCA_014695925.1_ASM1469592v1

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Seq: JACJPE010000096.1 (123124 bp)
Overview 1 RT 1: 41531-50110 bp Neighborhood of RT #1 [41531, 50127] COG4251 COG4251 RVT_N RVT-GII GIIM McrA KOG1203 NmrA_TMR_like_1_SDR_a UgpA Feature: gene Location: 41531-41776 bp Feature: gene Location: 41938-44457 bp Feature: domain Description: COG4251 Location: 41971-43615 bp Feature: domain Description: COG4251 Location: 41 971 -4361 5 bp Feature: domain Description: COG4251 Location: 43825-44437 bp Feature: domain Description: COG4251 Location: 43825-44437 bp Feature: gene Location: 45392-47239 bp Feature: domain Description: RVT_N Location: 45437-45683 bp Feature: domain Description: RVT_N Location: 45437-45683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45725-46424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45725-46424 bp Feature: domain Description: GIIM Note: maturase Location: 46532-46739 bp Feature: domain Description: GIIM Note: maturase Location: 46532-46739 bp Feature: domain Description: McrA Location: 46868-47132 bp Feature: domain Description: McrA Location: 46868-471 32 bp Feature: gene Location: 47350-48813 bp Feature: domain Description: KOG1203 Location: 47425-48517 bp Feature: domain Description: KOG1 203 Location: 47425-4851 7 bp Feature: domain Description: NmrA_TMR_like_1_SDR_a Location: 48646-48805 bp Feature: domain Description: NmrA_TMR_like_1 _SDR_a Location: 48646-48805 bp Feature: gene Location: 49249-50127 bp Feature: domain Description: UgpA Location: 49267-50110 bp Feature: domain Description: UgpA Location: 49267-501 1 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4251 (Bacteriophytochrome (light-regulated signal transduction histidine kinase) ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), KOG1203 (KOG1203, Predicted dehydrogenase ), NmrA_TMR_like_1_SDR_a (cd05231), UgpA (COG1175)

Seq: JACJPE010000003.1 (5813 bp)
Overview 1 RT 1: 712-5345 bp Neighborhood of RT #1 [712, 5410] RVT_N RVT-GII GIIM McrA PDC1_DGC_like RVT_N RVT-GII RVT-GII McrA Feature: gene Location: 712-2424 bp Feature: domain Description: RVT_N Location: 754-1000 bp Feature: domain Description: RVT_N Location: 754-1000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1042-1711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1042 -1711 bp Feature: domain Description: GIIM Note: maturase Location: 1810-2032 bp Feature: domain Description: GIIM Note: maturase Location: 1810-2 032 bp Feature: domain Description: McrA Location: 2113-2386 bp Feature: domain Description: McrA Location: 2 113-2 386 bp Feature: gene Location: 2545-2922 bp Feature: domain Description: PDC1_DGC_like Location: 2635-2845 bp Feature: domain Description: PDC1_DGC_like Location: 2 635-2 845 bp Feature: gene Location: 2949-3155 bp Feature: gene Location: 3483-3647 bp Feature: gene Location: 3833-5410 bp Feature: domain Description: RVT_N Location: 3869-4115 bp Feature: domain Description: RVT_N Location: 3869-4115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4166-4592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4166-4592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4592-4760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4592 -4760 bp Feature: domain Description: McrA Location: 4991-5345 bp Feature: domain Description: McrA Location: 4991-5345 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), PDC1_DGC_like (cd12914)

Seq: JACJPE010000103.1 (125915 bp)
Overview 1 RT 1: 121547-125848 bp Neighborhood of RT #1 [121547, 125848] PRK01096 RVT-UG19 Feature: gene Location: 121547-121777 bp Feature: gene Location: 121950-123272 bp Feature: domain Description: PRK01096 Location: 121956-123261 bp Feature: domain Description: PRK01096 Location: 121956-123 261 bp Feature: gene Location: 123378-125048 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 123750-124281 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 123 750-124281 bp Feature: gene Location: 125081-125848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK01096 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional), RVT-UG19