myRT

myRT report for GCA_014696435.1_ASM1469643v1

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Seq: JACJQG010000023.1 (115372 bp)
Overview 1 RT 1: 110692-115241 bp Neighborhood of RT #1 [110692, 115249] PRK07362 RVT_N RVT-GII RVT-GII McrA SodA Feature: gene Location: 110692-112113 bp Feature: domain Description: PRK07362 Location: 110695-112108 bp Feature: domain Description: PRK07362 Location: 1 1 0695-1 1 21 08 bp Feature: gene Location: 112221-112382 bp Feature: gene Location: 112684-114195 bp Feature: domain Description: RVT_N Location: 112720-112966 bp Feature: domain Description: RVT_N Location: 1 1 2720-1 1 2966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113017-113437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 301 7-1 1 3437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113446-113611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 3446-1 1 361 1 bp Feature: domain Description: McrA Location: 113857-114166 bp Feature: domain Description: McrA Location: 1 1 3857-1 1 41 66 bp Feature: gene Location: 114494-115249 bp Feature: domain Description: SodA Location: 114638-115241 bp Feature: domain Description: SodA Location: 1 1 4638-1 1 5241 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07362 (NADP-dependent isocitrate dehydrogenase), RVT_N (pfam13655), RVT-GII, McrA (COG4058), SodA (COG0605)

Seq: JACJQG010000039.1 (85606 bp)
Overview 1 RT 1: 75846-81049 bp Neighborhood of RT #1 [75846, 81390] Trp_halogenase PhoD RVT-GII NUC1 Trypsin_2 Feature: gene Location: 75846-77333 bp Feature: domain Description: Trp_halogenase Location: 75867-77229 bp Feature: domain Description: Trp_halogenase Location: 75867-772 2 9 bp Feature: gene Location: 77343-77921 bp Feature: domain Description: PhoD Location: 77424-77916 bp Feature: domain Description: PhoD Location: 7742 4-77916 bp Feature: gene Location: 78481-78780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78484-78715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78484-78715 bp Feature: gene Location: 79153-80127 bp Feature: domain Description: NUC1 Location: 79366-80026 bp Feature: domain Description: NUC1 Location: 79366-8002 6 bp Feature: gene Location: 80197-81390 bp Feature: domain Description: Trypsin_2 Location: 80572-81049 bp Feature: domain Description: Trypsin_2 Location: 80572 -81049 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Trp_halogenase (pfam04820), PhoD (pfam09423), RVT-GII, NUC1 (COG1864), Trypsin_2 (pfam13365)

Seq: JACJQG010000014.1 (157223 bp)
Overview 1 RT 1: 143234-151270 bp Neighborhood of RT #1 [143234, 151278] NadA TIGR04168 RVT-UG25 OmpA_C-like SMC_prok_A Feature: gene Location: 143234-144208 bp Feature: domain Description: NadA Location: 143294-144203 bp Feature: domain Description: NadA Location: 143 294-144203 bp Feature: gene Location: 144653-145663 bp Feature: domain Description: TIGR04168 Location: 144827-145631 bp Feature: domain Description: TIGR04168 Location: 144827-14563 1 bp Feature: gene Location: 145931-148924 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 147377-147779 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 1473 77-147779 bp Feature: gene Location: 149133-149846 bp Feature: domain Description: OmpA_C-like Location: 149340-149805 bp Feature: domain Description: OmpA_C-like Location: 1493 40-149805 bp Feature: gene Location: 149872-151278 bp Feature: domain Description: SMC_prok_A Location: 150520-151270 bp Feature: domain Description: SMC_prok_A Location: 150520-151270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NadA (pfam02445), TIGR04168 (TIGR04168 family protein), RVT-UG25, OmpA_C-like (cl30079), SMC_prok_A (TIGR02169)

Seq: JACJQG010000060.1 (60146 bp)
Overview 1 RT 1: 47504-54491 bp Neighborhood of RT #1 [47504, 54502] PRK07399 tmk RVT_N RVT-GII GIIM HNH AA_permease_2 PAS BaeS Feature: gene Location: 47504-48505 bp Feature: domain Description: PRK07399 Location: 47561-48494 bp Feature: domain Description: PRK07399 Location: 4 7561-4 84 94 bp Feature: gene Location: 48556-49239 bp Feature: domain Description: tmk Location: 48658-49225 bp Feature: domain Description: tmk Location: 4 8658-4 9225 bp Feature: gene Location: 49236-50951 bp Feature: domain Description: RVT_N Location: 49272-49515 bp Feature: domain Description: RVT_N Location: 4 9272-4 9515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49560-50256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 9560-50256 bp Feature: domain Description: GIIM Note: maturase Location: 50340-50568 bp Feature: domain Description: GIIM Note: maturase Location: 5034 0-50568 bp Feature: domain Description: HNH Note: nucleases Location: 50790-50925 bp Feature: domain Description: HNH Note: nucleases Location: 50790-50925 bp Feature: gene Location: 50965-51258 bp Feature: gene Location: 51704-54502 bp Feature: domain Description: AA_permease_2 Location: 51815-52937 bp Feature: domain Description: AA_permease_2 Location: 51815-52937 bp Feature: domain Description: PAS Location: 53327-53456 bp Feature: domain Description: PAS Location: 53327-534 56 bp Feature: domain Description: BaeS Location: 53477-54491 bp Feature: domain Description: BaeS Location: 534 77-54 4 91 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07399 (DNA polymerase III subunit delta'; Validated), tmk (PRK00698), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), AA_permease_2 (pfam13520), PAS (smart00091), BaeS (COG0642)

Seq: JACJQG010000087.1 (36600 bp)
Overview 1 RT 1: 33371-36495 bp Neighborhood of RT #1 [33371, 36506] GIY-YIG_AtGrxS16_like RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 33371-33916 bp Feature: domain Description: GIY-YIG_AtGrxS16_like Location: 33473-33680 bp Feature: domain Description: GIY-YIG_AtGrxS16_like Location: 33473-33680 bp Feature: gene Location: 34547-34684 bp Feature: gene Location: 34896-35468 bp Feature: domain Description: RVT_N Location: 34929-35175 bp Feature: domain Description: RVT_N Location: 34929-35 175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35217-35466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 217-35 466 bp Feature: gene Location: 35604-36506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35607-35883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 607-35 883 bp Feature: domain Description: GIIM Note: maturase Location: 35964-36195 bp Feature: domain Description: GIIM Note: maturase Location: 35 964-36195 bp Feature: domain Description: McrA Location: 36291-36495 bp Feature: domain Description: McrA Location: 36291-36495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIY-YIG_AtGrxS16_like (cd10450), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)