myRT

myRT report for GCA_014696555.1_ASM1469655v1

Download annotations/find similar RTs

Seq: JACJQH010000025.1 (115360 bp)
Overview 1 RT 1: 110686-115235 bp Neighborhood of RT #1 [110686, 115243] PRK07362 RVT_N RVT-GII RVT-GII McrA SodA Feature: gene Location: 110686-112107 bp Feature: domain Description: PRK07362 Location: 110689-112102 bp Feature: domain Description: PRK07362 Location: 1 1 0689-1 1 21 02 bp Feature: gene Location: 112215-112376 bp Feature: gene Location: 112678-114189 bp Feature: domain Description: RVT_N Location: 112714-112960 bp Feature: domain Description: RVT_N Location: 1 1 271 4-1 1 2960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113011-113431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 301 1 -1 1 3431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113440-113605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 3440-1 1 3605 bp Feature: domain Description: McrA Location: 113851-114160 bp Feature: domain Description: McrA Location: 1 1 3851 -1 1 41 60 bp Feature: gene Location: 114488-115243 bp Feature: domain Description: SodA Location: 114632-115235 bp Feature: domain Description: SodA Location: 1 1 4632-1 1 5235 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07362 (NADP-dependent isocitrate dehydrogenase), RVT_N (pfam13655), RVT-GII, McrA (COG4058), SodA (COG0605)

Seq: JACJQH010000044.1 (85594 bp)
Overview 1 RT 1: 75840-81043 bp Neighborhood of RT #1 [75840, 81384] Trp_halogenase PhoD RVT-GII NUC1 Trypsin_2 Feature: gene Location: 75840-77327 bp Feature: domain Description: Trp_halogenase Location: 75861-77223 bp Feature: domain Description: Trp_halogenase Location: 75861-772 2 3 bp Feature: gene Location: 77337-77915 bp Feature: domain Description: PhoD Location: 77418-77910 bp Feature: domain Description: PhoD Location: 77418-77910 bp Feature: gene Location: 78475-78774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78478-78709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78478-78709 bp Feature: gene Location: 79147-80121 bp Feature: domain Description: NUC1 Location: 79360-80020 bp Feature: domain Description: NUC1 Location: 79360-8002 0 bp Feature: gene Location: 80191-81384 bp Feature: domain Description: Trypsin_2 Location: 80566-81043 bp Feature: domain Description: Trypsin_2 Location: 80566-81043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Trp_halogenase (pfam04820), PhoD (pfam09423), RVT-GII, NUC1 (COG1864), Trypsin_2 (pfam13365)

Seq: JACJQH010000027.1 (109456 bp)
Overview 1 RT 1: 54961-61948 bp Neighborhood of RT #1 [54961, 61959] AA_permease_2 PAS BaeS RVT_N RVT-GII GIIM HNH tmk PRK07399 Feature: gene Location: 54961-57759 bp Feature: domain Description: AA_permease_2 Location: 55072-56194 bp Feature: domain Description: AA_permease_2 Location: 55072-56194 bp Feature: domain Description: PAS Location: 56584-56713 bp Feature: domain Description: PAS Location: 56584-56713 bp Feature: domain Description: BaeS Location: 56734-57748 bp Feature: domain Description: BaeS Location: 5673 4-57748 bp Feature: gene Location: 58205-58498 bp Feature: gene Location: 58512-60227 bp Feature: domain Description: RVT_N Location: 58548-58791 bp Feature: domain Description: RVT_N Location: 58548-58791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58836-59532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5883 6-5953 2 bp Feature: domain Description: GIIM Note: maturase Location: 59616-59844 bp Feature: domain Description: GIIM Note: maturase Location: 59616-59844 bp Feature: domain Description: HNH Note: nucleases Location: 60066-60201 bp Feature: domain Description: HNH Note: nucleases Location: 60066-60201 bp Feature: gene Location: 60218-60907 bp Feature: domain Description: tmk Location: 60326-60893 bp Feature: domain Description: tmk Location: 603 26-60893 bp Feature: gene Location: 60958-61959 bp Feature: domain Description: PRK07399 Location: 61015-61948 bp Feature: domain Description: PRK073 99 Location: 61015-61948 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AA_permease_2 (pfam13520), PAS (smart00091), BaeS (COG0642), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), tmk (PRK00698), PRK07399 (DNA polymerase III subunit delta'; Validated)

Seq: JACJQH010000080.1 (36590 bp)
Overview 1 RT 1: 33367-36491 bp Neighborhood of RT #1 [33367, 36502] GIY-YIG_AtGrxS16_like RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 33367-33912 bp Feature: domain Description: GIY-YIG_AtGrxS16_like Location: 33469-33676 bp Feature: domain Description: GIY-YIG_AtGrxS16_like Location: 334 69-33676 bp Feature: gene Location: 34543-34680 bp Feature: gene Location: 34892-35464 bp Feature: domain Description: RVT_N Location: 34925-35171 bp Feature: domain Description: RVT_N Location: 34 925-35171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35213-35462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35213-354 62 bp Feature: gene Location: 35600-36502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35603-35879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35603-35879 bp Feature: domain Description: GIIM Note: maturase Location: 35960-36191 bp Feature: domain Description: GIIM Note: maturase Location: 35960-36191 bp Feature: domain Description: McrA Location: 36287-36491 bp Feature: domain Description: McrA Location: 36287-364 91 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIY-YIG_AtGrxS16_like (cd10450), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JACJQH010000016.1 (157195 bp)
Overview 1 RT 1: 143228-151264 bp Neighborhood of RT #1 [143228, 151272] NadA TIGR04168 RVT-UG25 OmpA_C-like SMC_prok_A Feature: gene Location: 143228-144202 bp Feature: domain Description: NadA Location: 143288-144197 bp Feature: domain Description: NadA Location: 143288-144197 bp Feature: gene Location: 144647-145657 bp Feature: domain Description: TIGR04168 Location: 144821-145625 bp Feature: domain Description: TIGR04168 Location: 144821-145 625 bp Feature: gene Location: 145925-148918 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 147371-147773 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 147371-147773 bp Feature: gene Location: 149127-149840 bp Feature: domain Description: OmpA_C-like Location: 149334-149799 bp Feature: domain Description: OmpA_C-like Location: 149334-149799 bp Feature: gene Location: 149866-151272 bp Feature: domain Description: SMC_prok_A Location: 150514-151264 bp Feature: domain Description: SMC_prok_A Location: 15 05 14-15 1264 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NadA (pfam02445), TIGR04168 (TIGR04168 family protein), RVT-UG25, OmpA_C-like (cl30079), SMC_prok_A (TIGR02169)