myRT

myRT report for GCA_014696595.1_ASM1469659v1

Download annotations/find similar RTs

Seq: JACJQI010000005.1 (260339 bp)
Overview 1 RT 1: 13318-18967 bp 2 RT 2: 46478-51387 bp Neighborhood of RT #1 [13318, 19026] fghA_ester_D RVT_N RVT-GII GIIM McrA TPR TPR TPR TPR Neighborhood of RT #2 [46478, 51387] PRK12497 InsQ RVT_N RVT-GII GIIM McrA InsQ Feature: gene Location: 13318-14127 bp Feature: domain Description: fghA_ester_D Location: 13333-14107 bp Feature: domain Description: fghA_ester_D Location: 1 3333-1 41 07 bp Feature: gene Location: 14544-14690 bp Feature: gene Location: 14717-16606 bp Feature: domain Description: RVT_N Location: 14831-15077 bp Feature: domain Description: RVT_N Location: 1 4831 -1 5077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15119-15815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 1 9-1 581 5 bp Feature: domain Description: GIIM Note: maturase Location: 15902-16127 bp Feature: domain Description: GIIM Note: maturase Location: 1 5902-1 61 27 bp Feature: domain Description: McrA Location: 16220-16493 bp Feature: domain Description: McrA Location: 1 6220-1 6493 bp Feature: gene Location: 16617-16760 bp Feature: gene Location: 17149-19026 bp Feature: domain Description: TPR Location: 17887-18175 bp Feature: domain Description: TPR Location: 1 7887-1 81 75 bp Feature: domain Description: TPR Location: 18346-18559 bp Feature: domain Description: TPR Location: 1 8346-1 8559 bp Feature: domain Description: TPR Location: 18568-18853 bp Feature: domain Description: TPR Location: 1 8568-1 8853 bp Feature: domain Description: TPR Location: 18874-18967 bp Feature: domain Description: TPR Location: 1 8874-1 8967 bp Feature: gene Location: 46478-46960 bp Feature: domain Description: PRK12497 Location: 46502-46940 bp Feature: domain Description: PRK1 2497 Location: 46502-46940 bp Feature: gene Location: 47092-47562 bp Feature: domain Description: InsQ Location: 47098-47437 bp Feature: domain Description: InsQ Location: 47098-47437 bp Feature: gene Location: 48092-49846 bp Feature: domain Description: RVT_N Location: 48131-48377 bp Feature: domain Description: RVT_N Location: 481 31 -48377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48419-49118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4841 9-491 1 8 bp Feature: domain Description: GIIM Note: maturase Location: 49220-49445 bp Feature: domain Description: GIIM Note: maturase Location: 49220-49445 bp Feature: domain Description: McrA Location: 49526-49796 bp Feature: domain Description: McrA Location: 49526-49796 bp Feature: gene Location: 49873-50841 bp Feature: domain Description: InsQ Location: 49975-50722 bp Feature: domain Description: InsQ Location: 49975-50722 bp Feature: gene Location: 50893-51387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJQI010000074.1 (38471 bp)
Overview 1 RT 1: 4307-9652 bp Neighborhood of RT #1 [4307, 9672] Hydrolase_4 RVT_N RVT-GII GIIM McrA COG4941 Feature: gene Location: 4307-5404 bp Feature: domain Description: Hydrolase_4 Location: 4475-4835 bp Feature: domain Description: Hydrolase_4 Location: 4475-4835 bp Feature: gene Location: 5509-5703 bp Feature: gene Location: 5952-7517 bp Feature: domain Description: RVT_N Location: 5991-6231 bp Feature: domain Description: RVT_N Location: 5991-62 31 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6282-6939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 82 -6939 bp Feature: domain Description: GIIM Note: maturase Location: 6996-7191 bp Feature: domain Description: GIIM Note: maturase Location: 6996-7191 bp Feature: domain Description: McrA Location: 7203-7494 bp Feature: domain Description: McrA Location: 72 03-7494 bp Feature: gene Location: 7733-8098 bp Feature: gene Location: 8404-9672 bp Feature: domain Description: COG4941 Location: 8437-9652 bp Feature: domain Description: COG4941 Location: 8437-9652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJQI010000006.1 (216286 bp)
Overview 1 RT 1: 194478-197581 bp Neighborhood of RT #1 [194478, 197589] RVT_N RVT-GII McrA MFS_MJ1317_like Feature: gene Location: 194478-194879 bp Feature: gene Location: 195104-195280 bp Feature: gene Location: 195409-196983 bp Feature: domain Description: RVT_N Location: 195445-195691 bp Feature: domain Description: RVT_N Location: 195445-195691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195742-196399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195742-1963 99 bp Feature: domain Description: McrA Location: 196633-196954 bp Feature: domain Description: McrA Location: 19663 3 -196954 bp Feature: gene Location: 197037-197267 bp Feature: gene Location: 197353-197589 bp Feature: domain Description: MFS_MJ1317_like Location: 197365-197581 bp Feature: domain Description: MFS_MJ13 17_like Location: 1973 65-197581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJQI010000055.1 (50944 bp)
Overview 1 RT 1: 41384-45416 bp Neighborhood of RT #1 [41384, 45463] RVT_N RVT-GII McrA DUF2839 DUF1815 Feature: gene Location: 41384-41626 bp Feature: gene Location: 41894-42142 bp Feature: gene Location: 42233-43807 bp Feature: domain Description: RVT_N Location: 42269-42509 bp Feature: domain Description: RVT_N Location: 4 2269-4 2509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42566-43223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 2566-4 3223 bp Feature: domain Description: McrA Location: 43454-43784 bp Feature: domain Description: McrA Location: 4 34 54 -4 3784 bp Feature: gene Location: 43861-44085 bp Feature: domain Description: DUF2839 Location: 43897-44074 bp Feature: domain Description: DUF2839 Location: 4 3897-4 4 074 bp Feature: gene Location: 45116-45463 bp Feature: domain Description: DUF1815 Location: 45122-45416 bp Feature: domain Description: DUF1815 Location: 4 5122-4 54 16 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJQI010000001.1 (393253 bp)
Overview 1 RT 1: 379486-386894 bp Neighborhood of RT #1 [379486, 387109] GlpG RVT_N RVT-GII GIIM McrA TPR_12 TPR_12 COG4995 KOG1130 TPR Feature: gene Location: 379486-380160 bp Feature: domain Description: GlpG Location: 379489-380149 bp Feature: domain Description: GlpG Location: 379489-380149 bp Feature: gene Location: 380539-380709 bp Feature: gene Location: 380877-382766 bp Feature: domain Description: RVT_N Location: 380991-381237 bp Feature: domain Description: RVT_N Location: 380991-381237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381279-381975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381279-381975 bp Feature: domain Description: GIIM Note: maturase Location: 382062-382287 bp Feature: domain Description: GIIM Note: maturase Location: 382062-382287 bp Feature: domain Description: McrA Location: 382359-382680 bp Feature: domain Description: McrA Location: 38235 9-382680 bp Feature: gene Location: 383303-385192 bp Feature: domain Description: TPR_12 Location: 383387-383585 bp Feature: domain Description: TPR_12 Location: 383387-3835 85 bp Feature: domain Description: TPR_12 Location: 383615-383798 bp Feature: domain Description: TPR_12 Location: 383615 -383798 bp Feature: domain Description: COG4995 Location: 383909-385187 bp Feature: domain Description: COG4995 Location: 383909-385 187 bp Feature: gene Location: 385265-387109 bp Feature: domain Description: KOG1130 Location: 386261-386801 bp Feature: domain Description: KOG1130 Location: 386261-386801 bp Feature: domain Description: TPR Location: 386849-386894 bp Feature: domain Description: TPR Location: 386849-386894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJQI010000002.1 (369559 bp)
Overview 1 RT 1: 67576-71210 bp Neighborhood of RT #1 [67576, 71210] ParM_like RVT_N RVT-GII GIIM McrA Feature: gene Location: 67576-67881 bp Feature: gene Location: 67904-68812 bp Feature: domain Description: ParM_like Location: 68075-68777 bp Feature: domain Description: ParM_like Location: 6 8075-6 8777 bp Feature: gene Location: 68824-70401 bp Feature: domain Description: RVT_N Location: 68863-69097 bp Feature: domain Description: RVT_N Location: 6 886 3-6 9097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69154-69811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 9154-6 9811 bp Feature: domain Description: GIIM Note: maturase Location: 69868-70048 bp Feature: domain Description: GIIM Note: maturase Location: 6 986 8-70048 bp Feature: domain Description: McrA Location: 70048-70390 bp Feature: domain Description: McrA Location: 70048-70390 bp Feature: gene Location: 70597-70920 bp Feature: gene Location: 70944-71210 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJQI010000022.1 (129861 bp)
Overview 1 RT 1: 6168-11305 bp Neighborhood of RT #1 [6168, 11307] DUF5372 RVT-GII McrA psbA Feature: gene Location: 6168-6608 bp Feature: domain Description: DUF5372 Location: 6189-6393 bp Feature: domain Description: DUF537 2 Location: 6189-6393 bp Feature: gene Location: 6624-6791 bp Feature: gene Location: 6626-7789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6647-7205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6647 -7 205 bp Feature: domain Description: McrA Location: 7439-7760 bp Feature: domain Description: McrA Location: 7 439-7 7 60 bp Feature: gene Location: 8158-10107 bp Feature: gene Location: 10222-11307 bp Feature: domain Description: psbA Location: 10225-11305 bp Feature: domain Description: psbA Location: 10225-11305 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJQI010000010.1 (198371 bp)
Overview 1 RT 1: 26505-32610 bp Neighborhood of RT #1 [26505, 32648] sigpep_I_bact RVT-Retrons clpC Feature: gene Location: 26505-27077 bp Feature: domain Description: sigpep_I_bact Location: 26628-27060 bp Feature: domain Description: sigpep_I_bact Location: 26628 -27060 bp Feature: gene Location: 27744-27896 bp Feature: gene Location: 27965-29038 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 28148-28754 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 28 148 -28 754 bp Feature: gene Location: 29069-29977 bp Feature: gene Location: 30087-32648 bp Feature: domain Description: clpC Location: 30183-32610 bp Feature: domain Description: clpC Location: 3018 3-32610 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT