myRT

myRT report for GCA_014696655.1_ASM1469665v1

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Seq: JACJQM010000007.1 (158950 bp)
Overview 1 RT 1: 121939-128032 bp Neighborhood of RT #1 [121939, 128043] cztS_silS_copS GDE_N GDE_C RVT_N RVT-GII McrA GDE_N Feature: gene Location: 121939-123372 bp Feature: domain Description: cztS_silS_copS Location: 121978-123352 bp Feature: domain Description: cztS_silS_copS Location: 1 21 978-1 23352 bp Feature: gene Location: 123774-125360 bp Feature: domain Description: GDE_N Location: 123780-124065 bp Feature: domain Description: GDE_N Location: 1 23780-1 24065 bp Feature: domain Description: GDE_C Location: 124224-125337 bp Feature: domain Description: GDE_C Location: 1 24224-1 25337 bp Feature: gene Location: 125500-127080 bp Feature: domain Description: RVT_N Location: 125536-125776 bp Feature: domain Description: RVT_N Location: 1 25536-1 25776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125833-126496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 25833-1 26496 bp Feature: domain Description: McrA Location: 126727-127057 bp Feature: domain Description: McrA Location: 1 26727-1 27057 bp Feature: gene Location: 127171-127362 bp Feature: gene Location: 127627-128043 bp Feature: domain Description: GDE_N Location: 127711-128032 bp Feature: domain Description: GDE_N Location: 1 2771 1 -1 28032 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJQM010000090.1 (20188 bp)
Overview 1 RT 1: 16215-20187 bp Neighborhood of RT #1 [16215, 20186] YgcG LemA RVT_N RVT-GII Feature: gene Location: 16215-17516 bp Feature: domain Description: YgcG Location: 16401-17514 bp Feature: domain Description: YgcG Location: 16401-17514 bp Feature: gene Location: 17594-18376 bp Feature: domain Description: LemA Location: 17933-18359 bp Feature: domain Description: LemA Location: 17933-18359 bp Feature: gene Location: 19200-20186 bp Feature: domain Description: RVT_N Location: 19236-19476 bp Feature: domain Description: RVT_N Location: 192 36-19476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19533-20187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19533-2 0187 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJQM010000002.1 (289272 bp)
Overview 1 RT 1: 279050-283250 bp Neighborhood of RT #1 [279050, 283393] zf-UBP RVT_N RVT-GII GIIM HNHc HTH_MARR Feature: gene Location: 279050-279325 bp Feature: domain Description: zf-UBP Location: 279125-279299 bp Feature: domain Description: zf-UBP Location: 279125-279299 bp Feature: gene Location: 279831-280031 bp Feature: gene Location: 280109-281980 bp Feature: domain Description: RVT_N Location: 280154-280400 bp Feature: domain Description: RVT_N Location: 280154-280400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280442-281117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280442-281117 bp Feature: domain Description: GIIM Note: maturase Location: 281222-281453 bp Feature: domain Description: GIIM Note: maturase Location: 281222-281453 bp Feature: domain Description: HNHc Note: nucleases Location: 281654-281816 bp Feature: domain Description: HNHc Note: nucleases Location: 281654-281816 bp Feature: gene Location: 282303-282461 bp Feature: gene Location: 282857-283393 bp Feature: domain Description: HTH_MARR Location: 282992-283250 bp Feature: domain Description: HTH_MARR Location: 282992-283 250 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJQM010000205.1 (7098 bp)
Overview 1 RT 1: 4568-6981 bp Neighborhood of RT #1 [4568, 7010] AdoMet_MTases RVT-GII McrA Feature: gene Location: 4568-5368 bp Feature: domain Description: AdoMet_MTases Location: 4934-5255 bp Feature: domain Description: AdoMet_MTases Location: 4 934 -5255 bp Feature: gene Location: 5399-5815 bp Feature: gene Location: 5973-7010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5985-6426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5985-64 26 bp Feature: domain Description: McrA Location: 6657-6981 bp Feature: domain Description: McrA Location: 6657-6981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJQM010000352.1 (2825 bp)
Overview 1 RT 1: 2-1361 bp Neighborhood of RT #1 [2, 1361] RVT_N RVT-GII Feature: gene Location: 2-481 bp Feature: domain Description: RVT_N Location: 38-278 bp Feature: domain Description: RVT_N Location: 38-278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 335-482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 335 -482 bp Feature: gene Location: 885-1016 bp Feature: gene Location: 1056-1361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJQM010000074.1 (27763 bp)
Overview 1 RT 1: 21118-23981 bp Neighborhood of RT #1 [21118, 23986] DDE_Tnp_1 RVT_N RVT-GII DUF1392 Feature: gene Location: 21118-21849 bp Feature: domain Description: DDE_Tnp_1 Location: 21247-21562 bp Feature: domain Description: DDE_Tnp_1 Location: 21247-2156 2 bp Feature: gene Location: 21818-22237 bp Feature: gene Location: 22334-22846 bp Feature: domain Description: RVT_N Location: 22394-22586 bp Feature: domain Description: RVT_N Location: 22394-22586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22643-22739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 226 43-22739 bp Feature: gene Location: 22984-23214 bp Feature: gene Location: 23513-23986 bp Feature: domain Description: DUF1392 Location: 23516-23981 bp Feature: domain Description: DUF1392 Location: 23516 -23981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJQM010000283.1 (4421 bp)
Overview 1 RT 1: 954-4146 bp Neighborhood of RT #1 [954, 4146] RVT_N RVT-GII McrA Feature: gene Location: 954-1634 bp Feature: gene Location: 2268-2480 bp Feature: domain Description: RVT_N Location: 2304-2466 bp Feature: domain Description: RVT_N Location: 2304-2466 bp Feature: gene Location: 2554-3810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2602-3226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2602-3226 bp Feature: domain Description: McrA Location: 3457-3787 bp Feature: domain Description: McrA Location: 3457 -37 87 bp Feature: gene Location: 3982-4146 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJQM010000061.1 (34476 bp)
Overview 1 RT 1: 1-1611 bp Neighborhood of RT #1 [1, 1637] RVT-GII McrA YpfH DUF2555 Feature: gene Location: 1-660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-76 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-76 bp Feature: domain Description: McrA Location: 313-649 bp Feature: domain Description: McrA Location: 313-649 bp Feature: gene Location: 763-1269 bp Feature: domain Description: YpfH Location: 769-1264 bp Feature: domain Description: YpfH Location: 769-1264 bp Feature: gene Location: 1425-1637 bp Feature: domain Description: DUF2555 Location: 1452-1611 bp Feature: domain Description: DUF2555 Location: 1452-1611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJQM010000164.1 (9384 bp)
Overview 1 RT 1: 6153-9383 bp Neighborhood of RT #1 [6153, 9382] Rieske_RO_Alpha_PaO RHO_alpha_C_DMO-like RVT_N RVT-GII Feature: gene Location: 6153-6350 bp Feature: gene Location: 6804-7472 bp Feature: domain Description: Rieske_RO_Alpha_PaO Location: 6861-7257 bp Feature: domain Description: Rieske_RO_Alpha_PaO Location: 6861-7257 bp Feature: domain Description: RHO_alpha_C_DMO-like Location: 7323-7428 bp Feature: domain Description: RHO_alpha_C_DMO-like Location: 7323-7428 bp Feature: gene Location: 8396-9382 bp Feature: domain Description: RVT_N Location: 8432-8672 bp Feature: domain Description: RVT_N Location: 8432-8672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8729-9383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8729 -9 383 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJQM010000241.1 (5532 bp)
Overview 1 RT 1: 373-5037 bp Neighborhood of RT #1 [373, 5037] RVT_N RVT-GII McrA COG2263 AAA_34 Feature: gene Location: 373-1953 bp Feature: domain Description: RVT_N Location: 409-649 bp Feature: domain Description: RVT_N Location: 409-649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 706-1369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 706-1369 bp Feature: domain Description: McrA Location: 1603-1930 bp Feature: domain Description: McrA Location: 1603-1930 bp Feature: gene Location: 2035-4584 bp Feature: domain Description: COG2263 Location: 2371-2686 bp Feature: domain Description: COG2263 Location: 2371-2686 bp Feature: domain Description: AAA_34 Location: 3250-4216 bp Feature: domain Description: AAA_34 Location: 3250-4216 bp Feature: gene Location: 4642-5037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJQM010000212.1 (6753 bp)
Overview 1 RT 1: 1121-5951 bp Neighborhood of RT #1 [1121, 5989] DUF1392 RVT_N RVT-GII PRK02406 DUF3592 Feature: gene Location: 1121-1525 bp Feature: gene Location: 1544-1921 bp Feature: domain Description: DUF1392 Location: 1547-1916 bp Feature: domain Description: DUF1392 Location: 1547-1916 bp Feature: gene Location: 2229-3350 bp Feature: domain Description: RVT_N Location: 2265-2505 bp Feature: domain Description: RVT_N Location: 2265-2505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2562-3225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2562-3225 bp Feature: gene Location: 4247-5044 bp Feature: domain Description: PRK02406 Location: 4253-5003 bp Feature: domain Description: PRK02406 Location: 4253-5003 bp Feature: gene Location: 5468-5989 bp Feature: domain Description: DUF3592 Location: 5561-5951 bp Feature: domain Description: DUF3592 Location: 5561-5951 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJQM010000129.1 (12728 bp)
Overview 1 RT 1: 8584-12439 bp Neighborhood of RT #1 [8584, 12726] PRK05949 RVT_N RVT-GII GIIM McrA DDE_Tnp_1 Feature: gene Location: 8584-8832 bp Feature: gene Location: 8919-9545 bp Feature: domain Description: PRK05949 Location: 8955-9537 bp Feature: domain Description: PRK05949 Location: 8955-9537 bp Feature: gene Location: 9606-11243 bp Feature: domain Description: RVT_N Location: 9642-9876 bp Feature: domain Description: RVT_N Location: 9642-9876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9933-10590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9933-10590 bp Feature: domain Description: GIIM Note: maturase Location: 10647-10770 bp Feature: domain Description: GIIM Note: maturase Location: 10647-10770 bp Feature: domain Description: McrA Location: 10827-11205 bp Feature: domain Description: McrA Location: 10827-112 05 bp Feature: gene Location: 11492-11650 bp Feature: gene Location: 11815-12726 bp Feature: domain Description: DDE_Tnp_1 Location: 11854-12439 bp Feature: domain Description: DDE_Tnp_1 Location: 11854-12 439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJQM010000243.1 (5494 bp)
Overview 1 RT 1: 3816-5471 bp Neighborhood of RT #1 [3816, 5491] RVT-GII McrA Feature: gene Location: 3816-4226 bp Feature: gene Location: 4485-4781 bp Feature: gene Location: 4835-5491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4838-4907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4838-4907 bp Feature: domain Description: McrA Location: 5141-5471 bp Feature: domain Description: McrA Location: 5141-5471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT