myRT

myRT report for GCA_014696815.1_ASM1469681v1

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Seq: JACJQT010000013.1 Aphanizomenon flos-aquae FACHB-1040 contig13, whole genome shotgun sequence (91174 bp)
Overview 1 RT 1: 38821-42288 bp Neighborhood of RT #1 [38821, 42288] PTPS PTPS PTPS SpoU RVT-GII GIIM McrA Feature: gene Location: 38821-40089 bp Feature: domain Description: PTPS Location: 38833-39217 bp Feature: domain Description: PTPS Location: 38833-3921 7 bp Feature: domain Description: PTPS Location: 39229-39604 bp Feature: domain Description: PTPS Location: 39229-39604 bp Feature: domain Description: PTPS Location: 39628-40015 bp Feature: domain Description: PTPS Location: 39628-4001 5 bp Feature: gene Location: 40313-41107 bp Feature: domain Description: SpoU Location: 40319-41084 bp Feature: domain Description: SpoU Location: 4031 9-41 084 bp Feature: gene Location: 41223-41708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41229-41355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 229-41 355 bp Feature: domain Description: GIIM Note: maturase Location: 41457-41688 bp Feature: domain Description: GIIM Note: maturase Location: 41 457-41 688 bp Feature: gene Location: 41746-42081 bp Feature: domain Description: McrA Location: 41782-42049 bp Feature: domain Description: McrA Location: 41 782-42049 bp Feature: gene Location: 42154-42288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PTPS (pfam01242), SpoU (COG0566), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JACJQT010000017.1 Aphanizomenon flos-aquae FACHB-1040 contig17, whole genome shotgun sequence (81796 bp)
Overview 1 RT 1: 12470-18582 bp Neighborhood of RT #1 [12470, 18582] HicA_toxin TPR RVT-Retrons ahcY Feature: gene Location: 12470-12682 bp Feature: domain Description: HicA_toxin Location: 12533-12629 bp Feature: domain Description: HicA_toxin Location: 12 533-12 62 9 bp Feature: gene Location: 13097-13756 bp Feature: gene Location: 14165-15979 bp Feature: domain Description: TPR Location: 14303-14477 bp Feature: domain Description: TPR Location: 14303-14477 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14873-15494 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14873-15494 bp Feature: gene Location: 16043-17320 bp Feature: domain Description: ahcY Location: 16103-17318 bp Feature: domain Description: ahcY Location: 16103-17318 bp Feature: gene Location: 17773-18582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HicA_toxin (pfam07927), TPR (smart00028), RVT-Retrons, ahcY (TIGR00936)

Seq: JACJQT010000024.1 Aphanizomenon flos-aquae FACHB-1040 contig24, whole genome shotgun sequence (68371 bp)
Overview 1 RT 1: 25770-30725 bp Neighborhood of RT #1 [25770, 30745] RVT_N RVT-GII McrA HTH_MerR-trunc Feature: gene Location: 25770-27029 bp Feature: gene Location: 27882-28376 bp Feature: gene Location: 28497-30071 bp Feature: domain Description: RVT_N Location: 28533-28779 bp Feature: domain Description: RVT_N Location: 2853 3 -28779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28833-29487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2883 3 -29487 bp Feature: domain Description: McrA Location: 29718-30042 bp Feature: domain Description: McrA Location: 29718-3 0042 bp Feature: gene Location: 30191-30409 bp Feature: gene Location: 30602-30745 bp Feature: domain Description: HTH_MerR-trunc Location: 30626-30725 bp Feature: domain Description: HTH_MerR-trunc Location: 3 0626-3 0725 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, McrA (COG4058), HTH_MerR-trunc (cd04762)

Seq: JACJQT010000026.1 Aphanizomenon flos-aquae FACHB-1040 contig26, whole genome shotgun sequence (64840 bp)
Overview 1 RT 1: 36044-43260 bp Neighborhood of RT #1 [36044, 43376] XerC TSC22 RVT_N RVT-GII McrA AbiEii Feature: gene Location: 36044-38494 bp Feature: domain Description: XerC Location: 37145-38108 bp Feature: domain Description: XerC Location: 3714 5-38108 bp Feature: gene Location: 38598-39410 bp Feature: domain Description: TSC22 Location: 38766-38850 bp Feature: domain Description: TSC22 Location: 38766-38850 bp Feature: gene Location: 40133-41707 bp Feature: domain Description: RVT_N Location: 40169-40409 bp Feature: domain Description: RVT_N Location: 4 0169-4 04 09 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40466-41123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 04 66-4 1123 bp Feature: domain Description: McrA Location: 41357-41690 bp Feature: domain Description: McrA Location: 4 1357-4 1690 bp Feature: gene Location: 42059-42250 bp Feature: gene Location: 42555-43376 bp Feature: domain Description: AbiEii Location: 42834-43260 bp Feature: domain Description: AbiEii Location: 4 2834 -4 3260 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XerC (COG4973), TSC22 (pfam01166), RVT_N (pfam13655), RVT-GII, McrA (COG4058), AbiEii (pfam08843)

Seq: JACJQT010000041.1 Aphanizomenon flos-aquae FACHB-1040 contig41, whole genome shotgun sequence (52279 bp)
Overview 1 RT 1: 20280-23835 bp Neighborhood of RT #1 [20280, 23835] RVT_N RVT-GII McrA FkpA Feature: gene Location: 20280-20432 bp Feature: gene Location: 20610-20786 bp Feature: gene Location: 20917-22491 bp Feature: domain Description: RVT_N Location: 20953-21199 bp Feature: domain Description: RVT_N Location: 2095 3-21199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21250-21907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2125 0-21907 bp Feature: domain Description: McrA Location: 22138-22462 bp Feature: domain Description: McrA Location: 22138-22462 bp Feature: gene Location: 22598-23086 bp Feature: domain Description: FkpA Location: 22679-23084 bp Feature: domain Description: FkpA Location: 22679-23084 bp Feature: gene Location: 23197-23835 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, McrA (COG4058), FkpA (COG0545)

Seq: JACJQT010000053.1 Aphanizomenon flos-aquae FACHB-1040 contig53, whole genome shotgun sequence (41363 bp)
Overview 1 RT 1: 33081-37269 bp Neighborhood of RT #1 [33081, 37376] PIN_VapC4-5_FitB-like RVT-UG28b RAYT DUF4435 Feature: gene Location: 33081-33350 bp Feature: gene Location: 33347-33799 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 33449-33761 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 33449-3376 1 bp Feature: gene Location: 33903-35774 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 34503-35190 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 34503-35190 bp Feature: gene Location: 35927-36343 bp Feature: domain Description: RAYT Location: 35933-36251 bp Feature: domain Description: RAYT Location: 35933-36 251 bp Feature: gene Location: 36372-37376 bp Feature: domain Description: DUF4435 Location: 36453-37269 bp Feature: domain Description: DUF4435 Location: 36 453-3726 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PIN_VapC4-5_FitB-like (cd18754), RVT-UG28b, RAYT (COG1943), DUF4435 (pfam14491)

Seq: JACJQT010000054.1 Aphanizomenon flos-aquae FACHB-1040 contig54, whole genome shotgun sequence (41343 bp)
Overview 1 RT 1: 28812-35472 bp Neighborhood of RT #1 [28812, 35888] YdjM AAA_22 RVT_N RVT-GII GIIM RVT_N RVT-GII McrA KfrA_N Feature: gene Location: 28812-29855 bp Feature: domain Description: YdjM Location: 28815-29265 bp Feature: domain Description: YdjM Location: 28815-29265 bp Feature: gene Location: 29855-30808 bp Feature: domain Description: AAA_22 Location: 30035-30389 bp Feature: domain Description: AAA_22 Location: 30035-30389 bp Feature: gene Location: 31373-32701 bp Feature: domain Description: RVT_N Location: 31409-31655 bp Feature: domain Description: RVT_N Location: 31409-31655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31706-32360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 317 06-32360 bp Feature: domain Description: GIIM Note: maturase Location: 32417-32615 bp Feature: domain Description: GIIM Note: maturase Location: 32417 -32615 bp Feature: gene Location: 32959-33117 bp Feature: gene Location: 33239-34933 bp Feature: domain Description: RVT_N Location: 33272-33512 bp Feature: domain Description: RVT_N Location: 3327 2-33512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33569-34226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33569-34226 bp Feature: domain Description: McrA Location: 34463-34766 bp Feature: domain Description: McrA Location: 34463-347 66 bp Feature: gene Location: 35029-35157 bp Feature: gene Location: 35286-35888 bp Feature: domain Description: KfrA_N Location: 35325-35472 bp Feature: domain Description: KfrA_N Location: 35325-3547 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdjM (pfam04307), AAA_22 (pfam13401), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), KfrA_N (pfam11740)

Seq: JACJQT010000008.1 Aphanizomenon flos-aquae FACHB-1040 contig8, whole genome shotgun sequence (117860 bp)
Overview 1 RT 1: 6764-14744 bp Neighborhood of RT #1 [6764, 14998] rpl33 rps18 RVT_N RVT-GII McrA VacB DUF5118 DUF5117 DUF4953 Feature: gene Location: 6764-6958 bp Feature: domain Description: rpl33 Location: 6767-6956 bp Feature: domain Description: rpl33 Location: 6767-6956 bp Feature: gene Location: 6961-7176 bp Feature: domain Description: rps18 Location: 6970-7171 bp Feature: domain Description: rps18 Location: 6970-7171 bp Feature: gene Location: 7728-9299 bp Feature: domain Description: RVT_N Location: 7764-8004 bp Feature: domain Description: RVT_N Location: 7764-8 004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8061-8715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8 061-8 715 bp Feature: domain Description: McrA Location: 8949-9270 bp Feature: domain Description: McrA Location: 8 949-9270 bp Feature: gene Location: 9679-11739 bp Feature: domain Description: VacB Location: 9742-11623 bp Feature: domain Description: VacB Location: 9742-11623 bp Feature: gene Location: 12131-14998 bp Feature: domain Description: DUF5118 Location: 12476-12617 bp Feature: domain Description: DUF5118 Location: 12476-12617 bp Feature: domain Description: DUF5117 Location: 12659-13202 bp Feature: domain Description: DUF5117 Location: 12659-13202 bp Feature: domain Description: DUF4953 Location: 13775-14744 bp Feature: domain Description: DUF4953 Location: 13775-14744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpl33 (CHL00104), rps18 (CHL00077), RVT_N (pfam13655), RVT-GII, McrA (COG4058), VacB (COG0557), DUF5118 (pfam17162), DUF5117 (pfam17148), DUF4953 (pfam16313)