myRT

myRT report for GCA_014696895.1_ASM1469689v1

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Seq: JACJQX010000001.1 (310284 bp)
Overview 1 RT 1: 109324-116732 bp Neighborhood of RT #1 [109324, 116836] TldD TldD RVT-UG2 UvrD UvrD Feature: gene Location: 109324-110664 bp Feature: domain Description: TldD Location: 109342-110659 bp Feature: domain Description: TldD Location: 1 09342-1 1 0659 bp Feature: gene Location: 110749-112269 bp Feature: domain Description: TldD Location: 110896-112264 bp Feature: domain Description: TldD Location: 1 1 0896-1 1 2264 bp Feature: gene Location: 112653-113921 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 112851-113646 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 1 2851 -1 1 3646 bp Feature: gene Location: 113967-114182 bp Feature: gene Location: 114377-116836 bp Feature: domain Description: UvrD Location: 114503-115535 bp Feature: domain Description: UvrD Location: 1 1 4503-1 1 5535 bp Feature: domain Description: UvrD Location: 115922-116732 bp Feature: domain Description: UvrD Location: 1 1 5922-1 1 6732 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TldD (COG0312), RVT-UG2, UvrD (COG0210)

Seq: JACJQX010000106.1 (6809 bp)
Overview 1 RT 1: 282-4270 bp Neighborhood of RT #1 [282, 4341] RVT_N RVT-GII GIIM HNHc Uma2 XerD Feature: gene Location: 282-1997 bp Feature: domain Description: RVT_N Location: 336-582 bp Feature: domain Description: RVT_N Location: 336-582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 630-1308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 630-1308 bp Feature: domain Description: GIIM Note: maturase Location: 1377-1596 bp Feature: domain Description: GIIM Note: maturase Location: 1377-1596 bp Feature: domain Description: HNHc Note: nucleases Location: 1830-1980 bp Feature: domain Description: HNHc Note: nucleases Location: 1830-1980 bp Feature: gene Location: 2313-3086 bp Feature: domain Description: Uma2 Location: 2382-2904 bp Feature: domain Description: Uma2 Location: 2 382 -2 904 bp Feature: gene Location: 3322-4341 bp Feature: domain Description: XerD Location: 3481-4270 bp Feature: domain Description: XerD Location: 3481-42 70 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), Uma2 (pfam05685), XerD (COG4974)

Seq: JACJQX010000111.1 (5368 bp)
Overview 1 RT 1: 1538-5270 bp Neighborhood of RT #1 [1538, 5278] ParE RVT-Retrons SPFH_eoslipins_u2 SPFH_eoslipins_u2 SPFH_eoslipins_u2 Feature: gene Location: 1538-1831 bp Feature: gene Location: 1828-2118 bp Feature: domain Description: ParE Location: 1831-2113 bp Feature: domain Description: ParE Location: 183 1-2113 bp Feature: gene Location: 2212-3258 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2407-3016 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2407-3 016 bp Feature: gene Location: 3665-3859 bp Feature: gene Location: 4112-5278 bp Feature: domain Description: SPFH_eoslipins_u2 Location: 4133-4283 bp Feature: domain Description: SPFH_eoslipins_u2 Location: 413 3 -4283 bp Feature: domain Description: SPFH_eoslipins_u2 Location: 4532-4637 bp Feature: domain Description: SPFH_eoslipins_u2 Location: 453 2-463 7 bp Feature: domain Description: SPFH_eoslipins_u2 Location: 4952-5270 bp Feature: domain Description: SPFH_eoslipins_u2 Location: 4952-5270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE (COG3668), RVT-Retrons, SPFH_eoslipins_u2 (cd13438)