myRT

myRT report for GCA_014697075.1_ASM1469707v1

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Seq: JACJRE010000076.1 (31565 bp)
Overview 1 RT 1: 6768-14689 bp 2 RT 2: 25271-28384 bp Neighborhood of RT #1 [6768, 14689] MULE Rnase_HI_RT_non_LTR R1-I-EN RVT-UNC Neighborhood of RT #2 [25271, 29652] RVT-GII Feature: gene Location: 6768-8105 bp Feature: domain Description: MULE Location: 7443-7722 bp Feature: domain Description: MULE Location: 7443-7722 bp Feature: gene Location: 8565-9350 bp Feature: domain Description: Rnase_HI_RT_non_LTR Location: 8586-8895 bp Feature: domain Description: Rnase_HI_RT_non_LTR Location: 8586-8895 bp Feature: gene Location: 9299-12280 bp Feature: domain Description: R1-I-EN Location: 9326-9941 bp Feature: domain Description: R1 -I-EN Location: 9326-9941 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 10949-11420 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 0949-1 1 420 bp Feature: gene Location: 12295-13989 bp Feature: gene Location: 14369-14689 bp Feature: gene Location: 25271-25405 bp Feature: gene Location: 25558-25695 bp Feature: gene Location: 26254-29652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27808-28384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27808-28384 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MULE (pfam10551), Rnase_HI_RT_non_LTR (cd09276), R1-I-EN (cd09077), RVT-UG11/RVT-CRISPR/RVT-GII(RVT-UNC), RVT-GII

Seq: JACJRE010000132.1 (5171 bp)
Overview 1 RT 1: 2-3317 bp Neighborhood of RT #1 [2, 3325] RVT-CRISPR-like M48B_HtpX_like TIGR03985 Feature: gene Location: 2-331 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 209-332 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2 09-332 bp Feature: gene Location: 588-1622 bp Feature: domain Description: M48B_HtpX_like Location: 759-1599 bp Feature: domain Description: M48B_HtpX_like Location: 759-1599 bp Feature: gene Location: 1853-3325 bp Feature: domain Description: TIGR03985 Location: 2582-3317 bp Feature: domain Description: TIGR03985 Location: 2 582 -3317 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, M48B_HtpX_like (cd07339), TIGR03985 (CRISPR-associated protein, TIGR03985 family)

Seq: JACJRE010000096.1 (21018 bp)
Overview 1 RT 1: 3642-6356 bp Neighborhood of RT #1 [3642, 6356] RVT-GII McrA Feature: gene Location: 3642-3857 bp Feature: gene Location: 4000-4173 bp Feature: gene Location: 4444-5433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4552-4849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4552-4849 bp Feature: domain Description: McrA Location: 5086-5413 bp Feature: domain Description: McrA Location: 5086-5413 bp Feature: gene Location: 5484-5711 bp Feature: gene Location: 5745-6356 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, McrA (COG4058)